RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 NPBWR1P48145 328 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 IFNAR2P48551 515 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 PITPNBP48739 271 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 CNN1P51911 297 aaKnown RBP2.73□□□□□ -1.97
VBP1-203ENST00000535916 RPL27P61353 136 aaKnown RBP2.73□□□□□ -1.97
VBP1-203ENST00000535916 ELP6Q0PNE2 266 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 SPP2Q13103 211 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 SCGB2A2Q13296 93 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 KARSQ15046 597 aaKnown RBP2.73□□□□□ -1.97
VBP1-203ENST00000535916 CEBPEQ15744 281 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 IFI44LQ53G44 452 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 DLEU7Q6UYE1 221 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 WDR88Q6ZMY6 472 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 ASPGQ86U10 573 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 LAX1Q8IWV1 398 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 MKXQ8IYA7 352 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 RNF175Q8N4F7 328 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 FAM133AQ8N9E0 248 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 RNF149Q8NC42 400 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 FAM46BQ96A09 425 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 NSMCE2Q96MF7 247 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 OR5M11Q96RB7 305 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 ZNF559Q9BR84 538 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 RWDD1Q9H446 243 aaPredicted RBP2.73□□□□□ -1.97
VBP1-203ENST00000535916 ZNF665Q9H7R5 613 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 IL1RL2Q9HB29 575 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 ELL3Q9HB65 397 aaPredicted RBP2.73□□□□□ -1.97
VBP1-203ENST00000535916 MRPL17Q9NRX2 175 aaKnown RBP2.73□□□□□ -1.97
VBP1-203ENST00000535916 IMPAD1Q9NX62 359 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 AATFQ9NY61 560 aaKnown RBP eCLIP2.73□□□□□ -1.97
VBP1-203ENST00000535916 TMOD2Q9NZR1 351 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 ANKMY1Q9P2S6 941 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 LAMP5Q9UJQ1 280 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 ITM2BQ9Y287 266 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 NCAPD2Q15021 1401 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 TNRQ92752 1358 aa2.73□□□□□ -1.97
VBP1-203ENST00000535916 IGHV3OR16-12A0A075B7B8 117 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 A0A087X0K7 114 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 MACROD2A1Z1Q3 448 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 ANKDD1BA6NHY2 528 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 CSO75390 466 aaKnown RBP2.72□□□□□ -1.97
VBP1-203ENST00000535916 FOXH1O75593 365 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 SBK2P0C263 348 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 TPBGLP0DKB5 382 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 NCF1P14598 390 aaPredicted RBP2.72□□□□□ -1.97
VBP1-203ENST00000535916 P2RY4P51582 365 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 SRP54P61011 504 aaKnown RBP2.72□□□□□ -1.97
VBP1-203ENST00000535916 HMGN5P82970 282 aaKnown RBP2.72□□□□□ -1.97
VBP1-203ENST00000535916 SLC34A1Q06495 639 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 PDZK1IP1Q13113 114 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 SLC10A1Q14973 349 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 CCDC40Q4G0X9 1142 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 RIPPLY2Q5TAB7 128 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 RAET1GQ6H3X3 334 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 RGS9BPQ6ZS82 235 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 TAF8Q7Z7C8 310 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 OR13F1Q8NGS4 319 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 SHC3Q92529 594 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 C16orf74Q96GX8 76 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 PKNOX2Q96KN3 472 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 C17orf62Q9BQA9 187 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 ERP44Q9BS26 406 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 THUMPD2Q9BTF0 503 aaKnown RBP2.72□□□□□ -1.97
VBP1-203ENST00000535916 MIS18AQ9NYP9 233 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 CNOT2Q9NZN8 540 aaKnown RBP2.72□□□□□ -1.97
VBP1-203ENST00000535916 HPCAL4Q9UM19 191 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 TMED7Q9Y3B3 224 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 KIF3AQ9Y496 699 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 ETV7Q9Y603 341 aa2.72□□□□□ -1.97
VBP1-203ENST00000535916 SYNRGQ9UMZ2 1314 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 CDC42BPBQ9Y5S2 1711 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 ARHGAP42A6NI28 874 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 GPR89AB7ZAQ6 455 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 CLDN3O15551 220 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 LATO43561 262 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 SSX5O60225 188 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 GRAP2O75791 330 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 GJB5O95377 273 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 AK1P00568 194 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 KRT8P05787 483 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 GPR89BP0CG08 455 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 TSPY4P0CV99 314 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 TSPY10P0CW01 314 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 PDHBP11177 359 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 LAMP1P11279 417 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 KRT13P13646 458 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 UGT1A6P19224 532 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 PBLDP30039 288 aaPredicted RBP2.71□□□□□ -1.98
VBP1-203ENST00000535916 SOX6P35712 828 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 TRPC1P48995 793 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 HNRNPFP52597 415 aaKnown RBP2.71□□□□□ -1.98
VBP1-203ENST00000535916 ACTR1AP61163 376 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 EMC2Q15006 297 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 MICAQ29983 383 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 MAJINQ3KP22 176 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 RABL6Q3YEC7 729 aaPredicted RBP2.71□□□□□ -1.98
VBP1-203ENST00000535916 FAM219BQ5XKK7 198 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 AFTPHQ6ULP2 937 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 ARMCX2Q7L311 632 aa2.71□□□□□ -1.98
VBP1-203ENST00000535916 TGIF2LYQ8IUE0 185 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms