RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 TSPAN18Q96SJ8 248 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 COQ7Q99807 217 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 FAM173AQ9BQD7 235 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 CBWD1Q9BRT8 395 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 TTYH2Q9BSA4 534 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 SPXQ9BT56 116 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 ST6GALNAC5Q9BVH7 336 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 TRIM9Q9C026 710 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 TIGARQ9NQ88 270 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 LHX3Q9UBR4 397 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 BCAP29Q9UHQ4 241 aa3.17□□□□□ -1.9
CCDC7-207ENST00000535327 SYNJ2O15056 1496 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 IGKV6-21A0A0C4DH24 114 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 A0A0J9YVX5 310 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 TCP11X1B4DZS4 312 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 LRP3O75074 770 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 SLC4A1P02730 911 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 MT-ND3P03897 115 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 FNTAP49354 379 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 IL9RQ01113 521 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 PAX2Q02962 417 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 KIAA0040Q15053 153 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 TGIF1Q15583 401 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 CELF3Q5SZQ8 465 aaKnown RBP3.16□□□□□ -1.9
CCDC7-207ENST00000535327 IL23RQ5VWK5 629 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 FAM219BQ5XKK7 198 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 DPY19L2P2Q6ZN68 376 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 TSEN54Q7Z6J9 526 aaKnown RBP3.16□□□□□ -1.9
CCDC7-207ENST00000535327 ADAMTSL2Q86TH1 951 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 GPBP1Q86WP2 473 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 SLC13A3Q8WWT9 602 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 PHYHIPQ92561 330 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 EBF4Q9BQW3 602 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 APOOQ9BUR5 198 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 ATG10Q9H0Y0 220 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 NRN1Q9NPD7 142 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.16□□□□□ -1.9
CCDC7-207ENST00000535327 MLXQ9UH92 298 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 DNPEPQ9ULA0 475 aa3.16□□□□□ -1.9
CCDC7-207ENST00000535327 IGHV3OR16-12A0A075B7B8 117 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 CFAP73A6NFT4 308 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 ECDO95905 644 aaPredicted RBP3.15□□□□□ -1.91
CCDC7-207ENST00000535327 CXCL10P02778 98 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 GHRP10912 638 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 RALAP11233 206 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 SFNP31947 248 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 SAA4P35542 130 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 VCPP55072 806 aaKnown RBP3.15□□□□□ -1.91
CCDC7-207ENST00000535327 MYBPC1Q00872 1141 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 SMC1AQ14683 1233 aaKnown RBP3.15□□□□□ -1.91
CCDC7-207ENST00000535327 PPP1R3AQ16821 1122 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 MICAQ29983 383 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 VPS36Q86VN1 386 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 CENPSQ8N2Z9 138 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 CHCHD4Q8N4Q1 142 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 ARL10Q8N8L6 244 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 OR52J3Q8NH60 311 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 VN1R17PQ8TDU5 208 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 CRYGNQ8WXF5 182 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 P3H4Q92791 437 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 FRAT1Q92837 279 aaPredicted RBP3.15□□□□□ -1.91
CCDC7-207ENST00000535327 NLNQ9BYT8 704 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 XPO4Q9C0E2 1151 aaKnown RBP3.15□□□□□ -1.91
CCDC7-207ENST00000535327 ADGRL4Q9HBW9 690 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 ESM1Q9NQ30 184 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 CENPMQ9NSP4 180 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 IMPAD1Q9NX62 359 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 MIOXQ9UGB7 285 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 FETUBQ9UGM5 382 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 ZNF490Q9ULM2 529 aaPredicted RBP3.15□□□□□ -1.91
CCDC7-207ENST00000535327 FKBP7Q9Y680 259 aa3.15□□□□□ -1.91
CCDC7-207ENST00000535327 PTPRUQ92729 1446 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 RNF103-CHMP3A0A140T963 221 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 EPOPA6NHQ4 379 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 CCT8L1PA6NM43 557 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 C11orf98E9PRG8 122 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 STAM2O75886 525 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 ALPPP05187 535 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 ALPPL2P10696 532 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 ACP1P24666 158 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 TRIM23P36406 574 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 SLC6A8P48029 635 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 SLC25A1P53007 311 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 METAP1P53582 386 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 HERVK_113P63132 956 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 ERVK-8P63133 956 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 EIF2B1Q14232 305 aaKnown RBP3.14□□□□□ -1.91
CCDC7-207ENST00000535327 CD226Q15762 336 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 RAB12Q6IQ22 244 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 NEK5Q6P3R8 708 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 ATRAIDQ6UW56 229 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 P4HA3Q7Z4N8 544 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 GOLGA7Q7Z5G4 137 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 KDM8Q8N371 416 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 LHX4Q969G2 390 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 NDUFAF3Q9BU61 184 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 ERVK-6Q9BXR3 956 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 SIRPDQ9H106 197 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 TNMDQ9H2S6 317 aa3.14□□□□□ -1.91
CCDC7-207ENST00000535327 TSPY26PQ9H489 355 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms