RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 PXDC1Q5TGL8 231 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 PRPF38BQ5VTL8 546 aaKnown RBP3.84□□□□□ -1.8
SOX6-217ENST00000533870 LIPKQ5VXJ0 399 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 FAHD2BQ6P2I3 314 aaPredicted RBP3.84□□□□□ -1.8
SOX6-217ENST00000533870 SCD5Q86SK9 330 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 GTPBP8Q8N3Z3 284 aaPredicted RBP3.84□□□□□ -1.8
SOX6-217ENST00000533870 ZNF676Q8N7Q3 588 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 COPS5Q92905 334 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 FAHD2AQ96GK7 314 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 ZDHHC12Q96GR4 267 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 JAM3Q9BX67 310 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 FXYD6Q9H0Q3 95 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 FBRSQ9HAH7 460 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 TMPRSS4Q9NRS4 437 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 MAN2C1Q9NTJ4 1040 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 SPATA6Q9NWH7 488 aaPredicted RBP3.84□□□□□ -1.8
SOX6-217ENST00000533870 WDR45Q9Y484 360 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 HES2Q9Y543 173 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 WIF1Q9Y5W5 379 aa3.84□□□□□ -1.8
SOX6-217ENST00000533870 TMEM218A2RU14 115 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FABP7O15540 132 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RNF13O43567 381 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GSTZ1O43708 216 aaPredicted RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 B3GALNT1O75752 331 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HIST1H2ABP04908 130 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ELFN1P0C7U0 828 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 APEX1P27695 318 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 CORO1AP31146 461 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 RPL4P36578 427 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 GRK6P43250 576 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 VEGFCP49767 419 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RAB1AP62820 205 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PITX1P78337 314 aaPredicted RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 Q499Y3 187 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 TCTE1Q5JU00 501 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FAM71E1Q6IPT2 247 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 C3orf33Q6P1S2 294 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HIST3H2AQ7L7L0 130 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 OVCH2Q7RTZ1 564 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ANKRD46Q86W74 232 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ZNF454Q8N9F8 522 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 OR10H4Q8NGA5 316 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 TANKQ92844 425 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HIST1H2ACQ93077 130 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PTP4A1Q93096 173 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ECHDC3Q96DC8 303 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 KCNC2Q96PR1 638 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CNN2Q99439 309 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 KCNJ15Q99712 375 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SAP130Q9H0E3 1048 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 OR51I1Q9H343 314 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SMDT1Q9H4I9 107 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ZNF304Q9HCX3 659 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 DNAJC27Q9NZQ0 273 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 B4GALT6Q9UBX8 382 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 NDUFS4O43181 175 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 LRATO95237 230 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CHRM2P08172 466 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 TEAD1P28347 426 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ECI1P42126 302 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 AVPR1BP47901 424 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SRPXP78539 464 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ZNF792Q3KQV3 632 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 H3F3CQ6NXT2 135 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 C1orf94Q6P1W5 598 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CD200R1LQ6Q8B3 271 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 C6orf120Q7Z4R8 191 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 NRROSQ86YC3 692 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 TRAPPC5Q8IUR0 188 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 POGLUT1Q8NBL1 392 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GPR156Q8NFN8 814 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RSC1A1Q92681 617 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SIPA1Q96FS4 1042 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SEC22CQ9BRL7 303 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 URM1Q9BTM9 101 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 ZNF471Q9BX82 626 aaPredicted RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 HDHD5Q9BXW7 423 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ACPTQ9BZG2 426 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 KATNBL1Q9H079 304 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 NANSQ9NR45 359 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FBXL12Q9NXK8 326 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ZNF629Q9UEG4 869 aaPredicted RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 EPHA6Q9UF33 1036 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FBXL3Q9UKT7 428 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PADI3Q9ULW8 664 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 USP22Q9UPT9 525 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 KCNK7Q9Y2U2 307 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 TRAV1-2A0A0B4J238 106 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CASTOR2A6NHX0 329 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GABARAPH6UMI1 98 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FZD9O00144 591 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GFRA2O00451 464 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PTGESO14684 152 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 IFNA1P01562 189 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 TFP02787 698 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 MMP2P08253 660 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 OR2T7P0C7T2 308 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HTR1FP30939 366 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GPR1P46091 355 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HOXA1P49639 335 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms