RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ULK2Q8IYT8 1036 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 CCDC116Q8IYX3 515 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 ZNF781Q8N8C0 355 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 OR9A2Q8NGT5 310 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 ZNF675Q8TD23 568 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 OMA1Q96E52 524 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 C14orf79Q96F83 325 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 EBPLQ9BY08 206 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 EXO5Q9H790 373 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 EML4Q9HC35 981 aaKnown RBP17.32■□□□□ 0.36
SSH3-209ENST00000532600 SIRT5Q9NXA8 310 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 EHD3Q9NZN3 535 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 C15orf41Q9Y2V0 281 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 DNAJC15Q9Y5T4 150 aa17.32■□□□□ 0.36
SSH3-209ENST00000532600 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 CRCPO75575 148 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 SNX4O95219 450 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 HSPA4LO95757 839 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 DRD2P14416 443 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 GRK2P25098 689 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 PTPN6P29350 595 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 SSTR2P30874 369 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 TIA1P31483 386 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSH3-209ENST00000532600 TMED10P49755 219 aaKnown RBP17.31■□□□□ 0.36
SSH3-209ENST00000532600 NRG3P56975 720 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 BTKQ06187 659 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 CEBPEQ15744 281 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 SPIN4Q56A73 249 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 C6orf163Q5TEZ5 329 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 TRIM46Q7Z4K8 759 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 OR2T11Q8NH01 316 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSH3-209ENST00000532600 KAT2AQ92830 837 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 EXOSC8Q96B26 276 aaKnown RBP17.31■□□□□ 0.36
SSH3-209ENST00000532600 TMEM41AQ96HV5 264 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 LCORQ96JN0 433 aaPredicted RBP17.31■□□□□ 0.36
SSH3-209ENST00000532600 ALKBH4Q9NXW9 302 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 HAO1Q9UJM8 370 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 PSME2Q9UL46 239 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 EXO1Q9UQ84 846 aaKnown RBP17.31■□□□□ 0.36
SSH3-209ENST00000532600 ZNF780BQ9Y6R6 833 aa17.31■□□□□ 0.36
SSH3-209ENST00000532600 TEP1Q99973 2627 aaKnown RBP17.31■□□□□ 0.36
SSH3-209ENST00000532600 C2orf72A6NCS6 295 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 TO15178 435 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 UGT2B11O75310 529 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 JUNP05412 331 aaKnown RBP17.3■□□□□ 0.36
SSH3-209ENST00000532600 NEFHP12036 1026 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 NAGAP17050 411 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 DRD5P21918 477 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 PPICP45877 212 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 WNT3P56703 355 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 ACSM2AQ08AH3 577 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 EIPR1Q53HC9 387 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 DCST1Q5T197 706 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 ACSM2BQ68CK6 577 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 TMEM81Q6P7N7 255 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 NPSR1Q6W5P4 371 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 DMRTC2Q8IXT2 367 aaPredicted RBP17.3■□□□□ 0.36
SSH3-209ENST00000532600 CLYBLQ8N0X4 340 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 NAXEQ8NCW5 288 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 OR10Q1Q8NGQ4 319 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 TWIST2Q8WVJ9 160 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 HSPBAP1Q96EW2 488 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 TIMP4Q99727 224 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 GALNT9Q9HCQ5 603 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 KCNJ16Q9NPI9 418 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 B4GALT7Q9UBV7 327 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 GPR55Q9Y2T6 319 aaPredicted RBP17.3■□□□□ 0.36
SSH3-209ENST00000532600 SLC6A5Q9Y345 797 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 PCDHGB3Q9Y5G1 929 aa17.3■□□□□ 0.36
SSH3-209ENST00000532600 MED12Q93074 2177 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 GNG14A0A1W2PPG7 69 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 B4DXG7 233 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 GNB5O14775 395 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 PIP5K1BO14986 540 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 ACOX3O15254 700 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 CT45A8P0DMV1 189 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 CT45A9P0DMV2 189 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 ZFP36L2P47974 494 aaKnown RBP17.29■□□□□ 0.36
SSH3-209ENST00000532600 DLX5P56178 289 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 CORO7P57737 925 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 OCRLQ01968 901 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 TLE4Q04727 773 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 CT45A2Q5DJT8 189 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 TIGD3Q6B0B8 471 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 RNF165Q6ZSG1 346 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 Q6ZSR9 355 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 NUP54Q7Z3B4 507 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 PACS2Q86VP3 889 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 ZNF75CPQ92670 426 aaPredicted RBP17.29■□□□□ 0.36
SSH3-209ENST00000532600 VSTM2LQ96N03 204 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 BTBD9Q96Q07 612 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 MANSC1Q9H8J5 431 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 SLC35C2Q9NQQ7 365 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 PNPOQ9NVS9 261 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 CFL2Q9Y281 166 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 RAP2CQ9Y3L5 183 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 CCDC168Q8NDH2 2452 aa17.29■□□□□ 0.36
SSH3-209ENST00000532600 C15orf38-AP3S2A0A0A6YYH1 394 aa17.28■□□□□ 0.36
SSH3-209ENST00000532600 FRG2CA6NGY1 282 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms