RNA–Protein interactions for RNA: ENST00000532581.5

GRAMD1B-208, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-208ENST00000532581 SHFQ7M4L6 423 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 MEX3DQ86XN8 651 aaKnown RBP12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 LIX1LQ8IVB5 337 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 TTLQ8NG68 377 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 OR56A1Q8NGH5 318 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 CXorf40AQ8TE69 158 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 ATF6BQ99941 703 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 ANKRD19PQ9H560 264 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 TMEM39AQ9NV64 488 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 CHST10O43529 356 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 AKAP8O43823 692 aaKnown RBP12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 EFCAB14O75071 495 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 HLA-DPB1P04440 258 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 SERPIND1P05546 499 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 LINC00271P0C7V0 271 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 CFL1P23528 166 aaKnown RBP12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 CD79BP40259 229 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 CAV3P56539 151 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 DSG2Q14126 1118 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 PRICKLE2Q7Z3G6 844 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 TRIM48Q8IWZ4 208 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 PEX5LQ8IYB4 626 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 DUSP18Q8NEJ0 188 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 CHFRQ96EP1 664 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 CAPNS2Q96L46 248 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 YIPF4Q9BSR8 244 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 AICDAQ9GZX7 198 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 IRAK3Q9Y616 596 aa12.3□□□□□ -0.44
GRAMD1B-208ENST00000532581 PRRT4C9JH25 899 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 PPM1DO15297 605 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 HPGDSO60760 199 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ADH1CP00326 375 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 SLC35G4P0C7Q5 338 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 PRKAR1AP10644 381 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ALAS2P22557 587 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 SOX18P35713 384 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 NTHL1P78549 312 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 SLC9A5Q14940 896 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 TATDN3Q17R31 274 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 UAP1L1Q3KQV9 507 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ZNF311Q5JNZ3 666 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 KIAA1161Q6NSJ0 714 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 RTL10Q7L3V2 364 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ADCK2Q7Z695 626 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 UBE2J2Q8N2K1 259 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 RAB42Q8N4Z0 105 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ZFP41Q8N8Y5 198 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 LINC01555Q8NAE3 123 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 PIGXQ8TBF5 258 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 DIO2Q92813 273 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 TEX12Q9BXU0 123 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 TM7SF3Q9NS93 570 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 CNIH4Q9P003 139 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 SLC13A4Q9UKG4 626 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 POLHQ9Y253 713 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 DNMT3AQ9Y6K1 912 aaPredicted RBP12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 WASHC1A8K0Z3 465 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 PRKRAO75569 313 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 LALBAP00709 142 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ERP29P30040 261 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 OMPP47874 163 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 EVX1P49640 407 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ERVFC1P60507 584 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ST3GAL3Q11203 375 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 MAP4K2Q12851 820 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ARHGEF6Q15052 776 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 AADACL4Q5VUY2 407 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 MZT2AQ6P582 158 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 LHFPL3Q86UP9 236 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 KLHL36Q8N4N3 616 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 OSTF1Q92882 214 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 TRIM63Q969Q1 353 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 FAM46AQ96IP4 442 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 TMEM43Q9BTV4 400 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 GON7Q9BXV9 100 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 BEX2Q9BXY8 128 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 QRSL1Q9H0R6 528 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 SEMA4GQ9NTN9 838 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 ACOXLQ9NUZ1 547 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 MED17Q9NVC6 651 aa12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 EXOGQ9Y2C4 368 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 TCF20Q9UGU0 1960 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-208ENST00000532581 NOTCH4Q99466 2003 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 IGKV1-8A0A0C4DH67 115 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 GLOD5A6NK44 160 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 SURF4O15260 269 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 ERAL1O75616 437 aaKnown RBP12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 ALX3O95076 343 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 IGHA1P01876 353 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 FAM157BP0CG42 384 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 PSKH1P11801 424 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 FPR3P25089 353 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 IFNA8P32881 189 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 CDK3Q00526 305 aa12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 PRDX1Q06830 199 aaKnown RBP12.28□□□□□ -0.44
GRAMD1B-208ENST00000532581 MESP2Q0VG99 397 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms