RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 EFR3AQ14156 821 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 KANK2Q63ZY3 851 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 RTL6Q6ICC9 239 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 RNF165Q6ZSG1 346 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 SLC44A2Q8IWA5 706 aaPredicted RBP15.75■□□□□ 0.11
PHRF1-204ENST00000532550 DDIASQ8IXT1 998 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 GFM2Q969S9 779 aaKnown RBP15.75■□□□□ 0.11
PHRF1-204ENST00000532550 ADOQ96SZ5 270 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 SPOCK3Q9BQ16 436 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 TMEM109Q9BVC6 243 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 UCK2Q9BZX2 261 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 UBQLN3Q9H347 655 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 GLIPR2Q9H4G4 154 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 EXO1Q9UQ84 846 aaKnown RBP15.75■□□□□ 0.11
PHRF1-204ENST00000532550 OR10H1Q9Y4A9 318 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 FAM215AQ9Y5M1 114 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 ABCA12Q86UK0 2595 aa15.75■□□□□ 0.11
PHRF1-204ENST00000532550 INTS1Q8N201 2190 aaKnown RBP15.75■□□□□ 0.11
PHRF1-204ENST00000532550 PRAMEF25A6NGN4 478 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 FAM90A27PA6NNH2 459 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 AHRRA9YTQ3 701 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 PLOD2O00469 737 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 CBR3O75828 277 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 CHRNGP07510 517 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 TACR1P25103 407 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 PTPN6P29350 595 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 IL12BP29460 328 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 MC3RP41968 323 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 ZFP36L2P47974 494 aaKnown RBP15.74■□□□□ 0.11
PHRF1-204ENST00000532550 PNLIPRP2P54317 469 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 MRPS22P82650 360 aaKnown RBP15.74■□□□□ 0.11
PHRF1-204ENST00000532550 GALNTL6Q49A17 601 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 RFTN2Q52LD8 501 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-204ENST00000532550 TMEM107Q6UX40 140 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 LARP4Q71RC2 724 aaKnown RBP eCLIP15.74■□□□□ 0.11
PHRF1-204ENST00000532550 GDF7Q7Z4P5 450 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 MREGQ8N565 214 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 OR2T11Q8NH01 316 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 NTNG2Q96CW9 530 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 SLC35A4Q96G79 324 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 AMDHD1Q96NU7 426 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 TIMP4Q99727 224 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 TUBB1Q9H4B7 451 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 GALNT9Q9HCQ5 603 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 C19orf53Q9UNZ5 99 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-204ENST00000532550 TMED5Q9Y3A6 229 aa15.74■□□□□ 0.11
PHRF1-204ENST00000532550 NKX2-6A6NCS4 301 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 SNPHO15079 494 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 TSPAN2O60636 221 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 CREB1P16220 341 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 GCKP35557 465 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 SERPINB5P36952 375 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 PTGDSP41222 190 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 RPL38P63173 70 aaKnown RBP15.73■□□□□ 0.11
PHRF1-204ENST00000532550 ZNF155Q12901 538 aaPredicted RBP15.73■□□□□ 0.11
PHRF1-204ENST00000532550 SF3B4Q15427 424 aaKnown RBP eCLIP15.73■□□□□ 0.115e-7■■■□□ 18.9
PHRF1-204ENST00000532550 ZNHIT3Q15649 155 aaPredicted RBP15.73■□□□□ 0.11
PHRF1-204ENST00000532550 KRT71Q3SY84 523 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 EIPR1Q53HC9 387 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 WIPI1Q5MNZ9 446 aaPredicted RBP15.73■□□□□ 0.11
PHRF1-204ENST00000532550 SH2D4BQ5SQS7 431 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 VASNQ6EMK4 673 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 NPSR1Q6W5P4 371 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 MEX3BQ6ZN04 569 aaKnown RBP15.73■□□□□ 0.11
PHRF1-204ENST00000532550 ZCCHC23Q6ZST2 131 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 PM20D2Q8IYS1 436 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 ULK2Q8IYT8 1036 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 TWIST2Q8WVJ9 160 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 ELP4Q96EB1 424 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 CCT7Q99832 543 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 ENKD1Q9H0I2 346 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 REEP4Q9H6H4 257 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 DDX18Q9NVP1 670 aaKnown RBP15.73■□□□□ 0.11
PHRF1-204ENST00000532550 SH3BP4Q9P0V3 963 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 BAIAP2L1Q9UHR4 511 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 MAPRE3Q9UPY8 281 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 SLC6A5Q9Y345 797 aa15.73■□□□□ 0.11
PHRF1-204ENST00000532550 A0A0G2JNJ9 132 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 TMEM233B4DJY2 109 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 UPK1AO00322 258 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 LSM1O15116 133 aaKnown RBP15.72■□□□□ 0.11
PHRF1-204ENST00000532550 RGS16O15492 202 aaPredicted RBP15.72■□□□□ 0.11
PHRF1-204ENST00000532550 CTIFO43310 598 aaKnown RBP15.72■□□□□ 0.11
PHRF1-204ENST00000532550 AKAP10O43572 662 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 TOXO94900 526 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 BPGMP07738 259 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 GPC1P35052 558 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 ASMTP46597 345 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 PSG6Q00889 435 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 CRYZQ08257 329 aaKnown RBP15.72■□□□□ 0.11
PHRF1-204ENST00000532550 UGT3A2Q3SY77 523 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 CYP27C1Q4G0S4 372 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 YRDCQ86U90 279 aaKnown RBP15.72■□□□□ 0.11
PHRF1-204ENST00000532550 NUDCD3Q8IVD9 361 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 OR2L13Q8N349 312 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 WDSUB1Q8N9V3 476 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 FAM83FQ8NEG4 500 aaPredicted RBP15.72■□□□□ 0.11
PHRF1-204ENST00000532550 OR4N2Q8NGD1 307 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 AGR3Q8TD06 166 aa15.72■□□□□ 0.11
PHRF1-204ENST00000532550 ABTB1Q969K4 478 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms