RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MR1Q95460 341 aa20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 SLC47A1Q96FL8 570 aa20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 PELOQ9BRX2 385 aaKnown RBP20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 UGT2B28Q9BY64 529 aa20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 SEMA6AQ9H2E6 1030 aa20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 FOLH1BQ9HBA9 442 aa20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 FBXO34Q9NWN3 711 aa20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 HEMK1Q9Y5R4 338 aaPredicted RBP20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 AKAP13Q12802 2813 aa20.4■□□□□ 0.86
PACSIN3-209ENST00000532457 GXYLT2A0PJZ3 443 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 PRKNO60260 465 aaPredicted RBP20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 H6PDO95479 791 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 SEMG1P04279 462 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 KLK3P07288 261 aaPredicted RBP20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 GCKP35557 465 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 SELENOWP63302 87 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 PSG6Q00889 435 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 ELAVL1Q15717 326 aaKnown RBP20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 INTS11Q5TA45 600 aaKnown RBP20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 LPCAT4Q643R3 524 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 ZCCHC12Q6PEW1 402 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 FAM198BQ6UWH4 519 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 SMYD1Q8NB12 490 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 ZSCAN1Q8NBB4 408 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 C16orf52Q8NHV5 167 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 ZNF721Q8TF20 911 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 TPD52L3Q96J77 140 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 HSH2DQ96JZ2 352 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 VSTM2LQ96N03 204 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 SLC38A1Q9H2H9 487 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 C14orf105Q9NVL8 296 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 FOXJ2Q9P0K8 574 aa20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 SAMD4AQ9UPU9 718 aaKnown RBP20.39■□□□□ 0.86
PACSIN3-209ENST00000532457 CEP295Q9C0D2 2601 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 PRAMEF25A6NGN4 478 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 DUXAA6NLW8 204 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 STMND1H3BQB6 276 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 HNRNPRO43390 633 aaKnown RBP20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 MFN2O95140 757 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 IGKV3-11P04433 115 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 RAP2AP10114 183 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 GABRA3P34903 492 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 ANXA11P50995 505 aaKnown RBP20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 EMP2P54851 167 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 SLC37A1P57057 533 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 KCNJ10P78508 379 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 CHRNEQ04844 493 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 CHRNB3Q05901 458 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 DUSP7Q16829 419 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 FAM98BQ52LJ0 330 aaKnown RBP20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 GPAT3Q53EU6 434 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 CCNJQ5T5M9 372 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 ANKRD37Q7Z713 158 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 SLC30A8Q8IWU4 369 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 FKBP10Q96AY3 582 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 NUDT9Q9BW91 350 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 BCL2L10Q9HD36 194 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 C6orf203Q9P0P8 240 aaPredicted RBP20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 C3orf18Q9UK00 162 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 RPS6KA6Q9UK32 745 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 CLCA3PQ9Y6N3 262 aa20.39■□□□□ 0.85
PACSIN3-209ENST00000532457 ALOX12BO75342 701 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 ALOX5P09917 674 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 TNFRSF1BP20333 461 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 TXNL4AP83876 142 aaKnown RBP20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 LRRC74BQ6ZQY2 392 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 TSEN54Q7Z6J9 526 aaKnown RBP20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 PATL1Q86TB9 770 aaKnown RBP20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 METTL25Q8N6Q8 603 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 OR4N2Q8NGD1 307 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 SLC2A12Q8TD20 617 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 TRNT1Q96Q11 434 aaKnown RBP20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 SDF2Q99470 211 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 LMF2Q9BU23 707 aaKnown RBP20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 OR8D2Q9GZM6 311 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 QRSL1Q9H0R6 528 aaKnown RBP20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 AGPAT4Q9NRZ5 378 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 STOML1Q9UBI4 398 aa20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 GPC6Q9Y625 555 aaPredicted RBP20.38■□□□□ 0.85
PACSIN3-209ENST00000532457 SUV39H1O43463 412 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 COQ9O75208 318 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 KLF7O75840 302 aaPredicted RBP20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 NKX2-2O95096 273 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 CCNYL3P0C7X3 344 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 ZNF155Q12901 538 aaPredicted RBP20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 ARHGAP11BQ3KRB8 267 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 IQCCQ4KMZ1 466 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 NPSR1Q6W5P4 371 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 GPR32P1Q8NGA4 272 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 GPR151Q8TDV0 419 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 FBXL20Q96IG2 436 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 DOHHQ9BU89 302 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 EFHD1Q9BUP0 239 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 MAGIXQ9H6Y5 334 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 DUSP22Q9NRW4 184 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 ADPRHL2Q9NX46 363 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 LIPT1Q9Y234 373 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 MED19A0JLT2 244 aaPredicted RBP20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 DLGAP3O95886 979 aa20.37■□□□□ 0.85
PACSIN3-209ENST00000532457 CT45A8P0DMV1 189 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms