RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ELLP55199 621 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 PLP1P60201 277 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 S100A12P80511 92 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 SNTA1Q13424 505 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 CAPRIN1Q14444 709 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 GANABQ14697 944 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 FAM189A2Q15884 450 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 GOLGA7BQ2TAP0 167 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 FAM69BQ5VUD6 431 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 LIPJQ5W064 366 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 POLNQ7Z5Q5 900 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 SFR1Q86XK3 245 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 CMTM8Q8IZV2 173 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 LIX1Q8N485 282 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 CCDC185Q8N715 623 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 BMPERQ8N8U9 685 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 SDR9C7Q8NEX9 313 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 ESR2Q92731 530 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 ECHDC3Q96DC8 303 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 SGK494Q96LW2 274 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 COPS8Q99627 209 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 C1QTNF7Q9BXJ2 289 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 DUSP16Q9BY84 665 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 WDR55Q9H6Y2 383 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 OR2S2Q9NQN1 319 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 LYARQ9NX58 379 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 PLEK2Q9NYT0 353 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 LHX3Q9UBR4 397 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 GSTK1Q9Y2Q3 226 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 URGCP-MRPS24S4R325 110 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 ARAP3Q8WWN8 1544 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 UMODL1Q5DID0 1318 aa4.83□□□□□ -1.64
ECHDC1-222ENST00000531967 CHD1O14646 1710 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 A0A1B0GVG6 124 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 MTMR11A4FU01 709 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CLEC18AA5D8T8 446 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 E9PQ18 207 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 SMIM24O75264 130 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 SH3BGRLO75368 114 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CST4P01036 141 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 APRTP07741 180 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 KRT7P08729 469 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CTXN2P0C2S0 81 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 UBCP0CG48 685 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 ATP1B2P14415 290 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 KIR3DL2P43630 455 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 ERVFRD-1P60508 538 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 RPS7P62081 194 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 PPP2CBP62714 309 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 PPP2CAP67775 309 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 REEP5Q00765 189 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 FPGSQ05932 587 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 KNOP1Q1ED39 458 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 PRSS36Q5K4E3 855 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 KHDRBS2Q5VWX1 349 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 FAM71F2Q6NXP2 309 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 METTL2BQ6P1Q9 378 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CLEC18BQ6UXF7 455 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 Q6ZNB5 142 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 GPC2Q8N158 579 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 TXNDC5Q8NBS9 432 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CLEC18CQ8NCF0 446 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 OR5M1Q8NGP8 315 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 ZNF398Q8TD17 642 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 NUDCD2Q8WVJ2 157 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 TMEM125Q96AQ2 219 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 C10orf35Q96D05 121 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 B3GALT6Q96L58 329 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CXorf58Q96LI9 332 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CEP19Q96LK0 163 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 DEFB118Q96PH6 123 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 FUCA2Q9BTY2 467 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 UBXN6Q9BZV1 441 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 MIS12Q9H081 205 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 FOLH1BQ9HBA9 442 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CD209Q9NNX6 404 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 TAS2R7Q9NYW3 318 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 EPHA6Q9UF33 1036 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 MRM2Q9UI43 246 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 LNPEPQ9UIQ6 1025 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 GPR160Q9UJ42 338 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 FZD4Q9ULV1 537 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 MADDQ8WXG6 1647 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 PPIP5K1Q6PFW1 1433 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 MYOM2P54296 1465 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 TUBGCP6Q96RT7 1819 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 TRPM2O94759 1503 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 ABCC1P33527 1531 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 ERI2A8K979 691 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 H0YJX3 145 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CNOT3O75175 753 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 OR2J3O76001 311 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 HIST1H2AGP0C0S8 130 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 GSTT2P0CG29 244 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 GSTT2BP0CG30 244 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 SMIM18P0DKX4 95 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 TSPAN8P19075 237 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 HMOX2P30519 316 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 CFHR2P36980 270 aa4.82□□□□□ -1.64
ECHDC1-222ENST00000531967 AVPR1AP37288 418 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms