RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SRYQ05066 204 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 SIX1Q15475 284 aaPredicted RBP3.68□□□□□ -1.82
C11orf88-204ENST00000529661 CDKN3Q16667 212 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 LINC00242Q5T6M2 205 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 LRRC8BQ6P9F7 803 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 ZNF562Q6V9R5 426 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 NET1Q7Z628 596 aaPredicted RBP3.68□□□□□ -1.82
C11orf88-204ENST00000529661 RNF130Q86XS8 419 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 CCDC36Q8IYA8 594 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 SHC3Q92529 594 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 CHCHD5Q9BSY4 110 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 RPAP3Q9H6T3 665 aaPredicted RBP3.68□□□□□ -1.82
C11orf88-204ENST00000529661 ZNF446Q9NWS9 450 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 MUTYHQ9UIF7 546 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 FKBP7Q9Y680 259 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 FBLL1A6NHQ2 334 aaKnown RBP3.67□□□□□ -1.82
C11orf88-204ENST00000529661 RPL37AP8A6NKH3 93 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 H0YL77 283 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 K7ERI5 159 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 ALOX15BO15296 676 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 RIPK2O43353 540 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 TYROBPO43914 113 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 RANBP6O60518 1105 aaKnown RBP3.67□□□□□ -1.82
C11orf88-204ENST00000529661 IGSF6O95976 241 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 CALCBP10092 127 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 TNNI3P19429 210 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 LMO2P25791 158 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 UCP1P25874 307 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 HTR2AP28223 471 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 SHC1P29353 583 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 SPRP35270 261 aaPredicted RBP3.67□□□□□ -1.82
C11orf88-204ENST00000529661 CAPGP40121 348 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 PTGFRP43088 359 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 ATP4BP51164 291 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 KRTAP10-3P60369 221 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 HAND2P61296 217 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 ELP6Q0PNE2 266 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 ZP4Q12836 540 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 RAPSNQ13702 412 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 DCAF4L1Q3SXM0 396 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 TMEM41BQ5BJD5 291 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 C9orf66Q5T8R8 295 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 SLC25A24Q6NUK1 477 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 SLC39A4Q6P5W5 647 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 STOX1Q6ZVD7 989 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 C4orf32Q8N8J7 132 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 MIPOL1Q8TD10 442 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 ADIPOR1Q96A54 375 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 BIRC7Q96CA5 298 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 ATF6BQ99941 703 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 TTYH2Q9BSA4 534 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 APOOQ9BUR5 198 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 LIME1Q9H400 295 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 RIBC2Q9H4K1 309 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 KAT8Q9H7Z6 458 aaKnown RBP3.67□□□□□ -1.82
C11orf88-204ENST00000529661 SP140LQ9H930 580 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 ELL3Q9HB65 397 aaPredicted RBP3.67□□□□□ -1.82
C11orf88-204ENST00000529661 LPAR2Q9HBW0 351 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 FAM114A2Q9NRY5 505 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 AATFQ9NY61 560 aaKnown RBP eCLIP3.67□□□□□ -1.82
C11orf88-204ENST00000529661 KLRF1Q9NZS2 232 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 RABL2AQ9UBK7 228 aaPredicted RBP3.67□□□□□ -1.82
C11orf88-204ENST00000529661 GHRLQ9UBU3 117 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 SEC14L4Q9UDX3 406 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 ATP6V1HQ9UI12 483 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 KLK13Q9UKR3 277 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 MGAT4AQ9UM21 535 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 SLC9A8Q9Y2E8 581 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 DHRS7Q9Y394 339 aa3.67□□□□□ -1.82
C11orf88-204ENST00000529661 CARMIL1Q5VZK9 1371 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 TEX48A0A1B0GUV7 120 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 A0A1W2PPR1 153 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 TTC26A0AVF1 554 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 LRIT2A6NDA9 550 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 CCDC169A6NNP5 214 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 WASH3PC4AMC7 463 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 H3BMH7 237 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 SDHDO14521 159 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 PDE5AO76074 875 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 FCGR3AP08637 254 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 TSPY4P0CV99 314 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 TSPY10P0CW01 314 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 TSPAN8P19075 237 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 CALML3P27482 149 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 PBLDP30039 288 aaPredicted RBP3.66□□□□□ -1.82
C11orf88-204ENST00000529661 IFNAR2P48551 515 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 GSK3BP49841 420 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 NOP14P78316 857 aaKnown RBP3.66□□□□□ -1.82
C11orf88-204ENST00000529661 CD300CQ08708 224 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 EXOSC2Q13868 293 aaKnown RBP3.66□□□□□ -1.82
C11orf88-204ENST00000529661 ZNF239Q16600 458 aaKnown RBP3.66□□□□□ -1.82
C11orf88-204ENST00000529661 PCK2Q16822 640 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 ZNF311Q5JNZ3 666 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 DMKNQ6E0U4 476 aaPredicted RBP3.66□□□□□ -1.82
C11orf88-204ENST00000529661 SPINK14Q6IE38 97 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 NIPAL3Q6P499 406 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 WASH2PQ6VEQ5 465 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 RGS9BPQ6ZS82 235 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 LPCAT2Q7L5N7 544 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 ERASQ7Z444 233 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms