RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	DEFA3	P59666	94 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ACSM2A	Q08AH3	577 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	NDUFA9	Q16795	377 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	SYT16	Q17RD7	645 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	HKDC1	Q2TB90	917 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	PHF19	Q5T6S3	580 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ACSM2B	Q68CK6	577 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	DESI1	Q6ICB0	168 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	TRIM40	Q6P9F5	258 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ABHD13	Q7L211	337 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	GPR135	Q8IZ08	494 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	METTL4	Q8N3J2	472 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	PARP16	Q8N5Y8	322 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	AGBL5	Q8NDL9	886 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	CREB3L4	Q8TEY5	395 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	PIK3R3	Q92569	461 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	GGH	Q92820	318 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	TM4SF19	Q96DZ7	209 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	PHOX2B	Q99453	314 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	REXO4	Q9GZR2	422 aa	Known RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	CHST8	Q9H2A9	424 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	MKLN1	Q9UL63	735 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	RUVBL1	Q9Y265	456 aa	Known RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	PADI2	Q9Y2J8	665 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	PNMA8C	A0A1B0GUJ8	204 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	LRIT2	A6NDA9	550 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540		A8MVJ9	347 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540		H0YGG7	62 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	DIRAS1	O95057	198 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	SERPIND1	P05546	499 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	DBT	P11182	482 aa	Known RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	PPIB	P23284	216 aa	Known RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	GSTM5	P46439	218 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	SEPHS1	P49903	392 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	UGT2B15	P54855	530 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ARF3	P61204	181 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	CYP4F2	P78329	520 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	OLR1	P78380	273 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	KCNJ10	P78508	379 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	7e-7	■■■■□ 23.2
NR1H3-231	ENST00000529540	UGT8	Q16880	541 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	GARNL3	Q5VVW2	1013 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	NOXRED1	Q6NXP6	359 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ZNF367	Q7RTV3	350 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	VN1R4	Q7Z5H5	301 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	CSNK1A1L	Q8N752	337 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	OR2L5	Q8NG80	312 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	OR8J2	Q8NGG1	315 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ZNF675	Q8TD23	568 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	UBE2F	Q969M7	185 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	GAL3ST3	Q96A11	431 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	RGMA	Q96B86	450 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	APIP	Q96GX9	242 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ZNF285	Q96NJ3	590 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	KCNC2	Q96PR1	638 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	CMKLR1	Q99788	373 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	SLC6A16	Q9GZN6	736 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	SIAE	Q9HAT2	523 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	FAM60A	Q9NP50	221 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	SERTAD3	Q9UJW9	196 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ADAM29	Q9UKF5	820 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	CDV3	Q9UKY7	258 aa	Known RBP	13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	CORO2B	Q9UQ03	480 aa		13.69	□□□□□ -0.22
NR1H3-231	ENST00000529540	ASCC3	Q8N3C0	2202 aa	Known RBP	13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540		A8MU76	341 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	SLC30A4	O14863	429 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	TGFB1	P01137	390 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	ABCB1	P08183	1280 aa	Predicted RBP	13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	GABRB1	P18505	474 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	PCGF2	P35227	344 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	EIF3I	Q13347	325 aa	Known RBP	13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	GRM7	Q14831	915 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	FAM214A	Q32MH5	1076 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	VN1R5	Q7Z5H4	357 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	CCDC190	Q86UF4	302 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	SLC7A5P1	Q8MH63	180 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	CACTIN-AS1	Q8N1I8	211 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	DEPDC4	Q8N2C3	294 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	DEFB124	Q8NES8	71 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	DEPDC7	Q96QD5	511 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	PANX1	Q96RD7	426 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	CCDC32	Q9BV29	185 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	TPK1	Q9H3S4	243 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	ADPRHL2	Q9NX46	363 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	MAPRE3	Q9UPY8	281 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	TRAPPC4	Q9Y296	219 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	POFUT2	Q9Y2G5	429 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	PCDHGB6	Q9Y5F9	930 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	HEATR5B	Q9P2D3	2071 aa		13.68	□□□□□ -0.22
NR1H3-231	ENST00000529540	DKK1	O94907	266 aa		13.67	□□□□□ -0.22
NR1H3-231	ENST00000529540	ADORA3	P0DMS8	318 aa		13.67	□□□□□ -0.22
NR1H3-231	ENST00000529540	GRK5	P34947	590 aa		13.67	□□□□□ -0.22
NR1H3-231	ENST00000529540	GABRA4	P48169	554 aa		13.67	□□□□□ -0.22
NR1H3-231	ENST00000529540	VSX2	P58304	361 aa	Predicted RBP	13.67	□□□□□ -0.22
NR1H3-231	ENST00000529540	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms