RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 HAS2Q92819 552 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 MAGED4Q96JG8 741 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 C5orf34Q96MH7 638 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 VSTM2LQ96N03 204 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 TRNT1Q96Q11 434 aaKnown RBP7.35□□□□□ -1.23
SSBP3-211ENST00000528787 SMAD5Q99717 465 aaKnown RBP7.35□□□□□ -1.23
SSBP3-211ENST00000528787 NUDT9Q9BW91 350 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 PAIP1Q9H074 479 aaKnown RBP7.35□□□□□ -1.23
SSBP3-211ENST00000528787 MUC13Q9H3R2 512 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 CXorf36Q9H7Y0 433 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 SLAMF7Q9NQ25 335 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 SERHLQ9NQF3 203 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 SIRT3Q9NTG7 399 aaPredicted RBP7.35□□□□□ -1.23
SSBP3-211ENST00000528787 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 PRPF19Q9UMS4 504 aaKnown RBP7.35□□□□□ -1.23
SSBP3-211ENST00000528787 ABCG2Q9UNQ0 655 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF232Q9UNY5 417 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 ERVK-11Q9UQG0 969 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 NPFFR2Q9Y5X5 522 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 SPEGQ15772 3267 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 DOCK10Q96BY6 2186 aa7.35□□□□□ -1.23
SSBP3-211ENST00000528787 TRAV17A0A0B4J275 112 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 IGHV3-20A0A0C4DH32 117 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 A0A0G2JPF8 293 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 OR2W5A6NFC9 320 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 B2RBV5 119 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 HNRNPCL2B2RXH8 293 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 HNRNPCL3B7ZW38 293 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 TGFBR3LH3BV60 316 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 SCDO00767 359 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 GYG2O15488 501 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 ITGA10O75578 1167 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 NKX2-2O95096 273 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 UNC5CO95185 931 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 SNX4O95219 450 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 IL33O95760 270 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 P04436 131 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 NGFRP08138 427 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 HNRNPCL4P0DMR1 293 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 NR2F1P10589 423 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 BMP2P12643 396 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 UQCRBP14927 111 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 S1PR1P21453 382 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 GABRA3P34903 492 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 GCKP35557 465 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 ZFP36L2P47974 494 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 HLCSP50747 726 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 CDK9P50750 372 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 NR0B1P51843 470 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 EEFSECP57772 596 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 OC90Q02509 493 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 SF3A3Q12874 501 aaKnown RBP eCLIP7.34□□□□□ -1.236e-12■■■■■ 79.1
SSBP3-211ENST00000528787 VEZF1Q14119 521 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 ELOAQ14241 798 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 EXOSC7Q15024 291 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 LARS2Q15031 903 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 LTB4RQ15722 352 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF750Q32MQ0 723 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 ARHGAP11BQ3KRB8 267 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 RUNDC3AQ59EK9 446 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 B3GNTL1Q67FW5 361 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 REEP3Q6NUK4 255 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 TCTN3Q6NUS6 607 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 TMEM81Q6P7N7 255 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 FAM111BQ6SJ93 734 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 PATL1Q86TB9 770 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 RNF130Q86XS8 419 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 SLC44A2Q8IWA5 706 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 CMIPQ8IY22 773 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 PEX5LQ8IYB4 626 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 POGLUT1Q8NBL1 392 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 SPPL2AQ8TCT8 520 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 BRIX1Q8TDN6 353 aaKnown RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 XAGE5Q8WWM1 108 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 LZICQ8WZA0 190 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 DIO2Q92813 273 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 ADIPOR1Q96A54 375 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 MCUR1Q96AQ8 359 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 RCN3Q96D15 328 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 SPACA9Q96E40 222 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 RNF145Q96MT1 663 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 COL21A1Q96P44 957 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 ITPAQ9BY32 194 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 TRIM15Q9C019 465 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 OR51I1Q9H343 314 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 CDCP1Q9H5V8 836 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 TMEM38AQ9H6F2 299 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 MTHFD2LQ9H903 347 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 A4GALTQ9NPC4 353 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 EQTNQ9NQ60 294 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 UBQLN4Q9NRR5 601 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 GPATCH2Q9NW75 528 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 B4GALT7Q9UBV7 327 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 SLC13A4Q9UKG4 626 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 KLF13Q9Y2Y9 288 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-211ENST00000528787 IFT52Q9Y366 437 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 CPAMD8Q8IZJ3 1885 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 NCOR2Q9Y618 2525 aa7.34□□□□□ -1.23
SSBP3-211ENST00000528787 ANKRD11Q6UB99 2663 aaPredicted RBP7.33□□□□□ -1.24
SSBP3-211ENST00000528787 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms