RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 STAT5AP42229 794 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 MXD1Q05195 221 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 TMEM184AQ6ZMB5 413 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 GID4Q8IVV7 300 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ELF4Q99607 663 aaPredicted RBP14.18□□□□□ -0.14
USP47-207ENST00000527733 MND1Q9BWT6 205 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 FAM118AQ9NWS6 357 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ATG4BQ9Y4P1 393 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ABCB7O75027 752 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ADORA3P0DMS8 318 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 BRCA1P38398 1863 aaKnown RBP14.18□□□□□ -0.14
USP47-207ENST00000527733 TLR1Q15399 786 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 SYPL1Q16563 259 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 NADK2Q4G0N4 442 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 TP53I13Q8NBR0 393 aaPredicted RBP14.18□□□□□ -0.14
USP47-207ENST00000527733 TMEM80Q96HE8 168 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 BMFQ96LC9 184 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 DHCR7Q9UBM7 475 aaKnown RBP14.18□□□□□ -0.14
USP47-207ENST00000527733 TDRD15B5MCY1 1934 aaKnown RBP14.18□□□□□ -0.14
USP47-207ENST00000527733 A8MVJ9 347 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ZNF670-ZNF695F2Z2N8 137 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ACPPP15309 386 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 PPP3R1P63098 170 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 DSG2Q14126 1118 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 RGS21Q2M5E4 152 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 KCTD21Q4G0X4 260 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ABHD17BQ5VST6 288 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 Q7L0L9 218 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 CLIP4Q8N3C7 705 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 ZNF583Q96ND8 569 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 LRRC3BQ96PB8 259 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 OR6C1Q96RD1 312 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 BTBD2Q9BX70 525 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 B3GAT2Q9NPZ5 323 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 HPF1Q9NWY4 346 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 WDR37Q9Y2I8 494 aa14.18□□□□□ -0.14
USP47-207ENST00000527733 C11orf98E9PRG8 122 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 SDC2P34741 201 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 SLC48A1Q6P1K1 146 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 TMEM92Q6UXU6 159 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 NRMQ8IXM6 262 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 MARVELD2Q8N4S9 558 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 MCCC2Q9HCC0 563 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 IGHA2P01877 340 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 GPR4P46093 362 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 WDR53Q7Z5U6 358 aaPredicted RBP14.17□□□□□ -0.14
USP47-207ENST00000527733 GPAT4Q86UL3 456 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 POC5Q8NA72 575 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 ZNF548Q8NEK5 533 aaPredicted RBP14.17□□□□□ -0.14
USP47-207ENST00000527733 GDF15Q99988 308 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 CD93Q9NPY3 652 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 TRIM36Q9NQ86 728 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 NUDT7P0C024 238 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 IL9P15248 144 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 DCAF7P61962 342 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 GK3PQ14409 553 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 PERM1Q5SV97 790 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 HDDC2Q7Z4H3 204 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 PRR22Q8IZ63 422 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 FRMD1Q8N878 549 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 ZFP90Q8TF47 636 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 MS4A6EQ96DS6 147 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 TRNT1Q96Q11 434 aaKnown RBP14.17□□□□□ -0.14
USP47-207ENST00000527733 ITPAQ9BY32 194 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 TCF7L1Q9HCS4 588 aa14.17□□□□□ -0.14
USP47-207ENST00000527733 GXYLT2A0PJZ3 443 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 LOC110117498-PIK3R3F6TDL0 507 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 PLD2O14939 933 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 ASNA1O43681 348 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 AHCYL1O43865 530 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 XPNPEP2O43895 674 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 COL9A1P20849 921 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 MNDAP41218 407 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 CDKN2CP42773 168 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 TSSK4Q6SA08 328 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 ARL9Q6T311 187 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 CADM4Q8NFZ8 388 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 DNAJA4Q8WW22 397 aaPredicted RBP14.16□□□□□ -0.14
USP47-207ENST00000527733 TEX37Q96LM6 180 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 ADOQ96SZ5 270 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 KCNS3Q9BQ31 491 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 TREX2Q9BQ50 279 aaPredicted RBP14.16□□□□□ -0.14
USP47-207ENST00000527733 A6NCN8 305 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 FRS3O43559 492 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 EFR3AQ14156 821 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 MAPK14Q16539 360 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 MICAQ29983 383 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 RAET1LQ5VY80 246 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 CNIH3Q8TBE1 160 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 COQ7Q99807 217 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 GLIPR2Q9H4G4 154 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 CXorf36Q9H7Y0 433 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 OTOFQ9HC10 1997 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 K7EQS6 105 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 VILLO15195 856 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 ELK4P28324 431 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 SLC6A8P48029 635 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 MLLT10P55197 1068 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 DCDP81605 110 aaKnown RBP14.16□□□□□ -0.14
USP47-207ENST00000527733 ST3GAL4Q11206 333 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms