RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 MLKLQ8NB16 471 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 FLVCR1-AS1Q8TAF5 88 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 GIPC3Q8TF64 312 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 SELENOMQ8WWX9 145 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 THRSPQ92748 146 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 PCED1BQ96HM7 432 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 PNNQ9H307 717 aaKnown RBP3.52□□□□□ -1.85
CD44-223ENST00000526553 TNFRSF19Q9NS68 423 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 CENPMQ9NSP4 180 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 AATFQ9NY61 560 aaKnown RBP eCLIP3.52□□□□□ -1.85
CD44-223ENST00000526553 TMOD2Q9NZR1 351 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 EXTL2Q9UBQ6 330 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 DUSP12Q9UNI6 340 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 CHMP2BQ9UQN3 213 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 TOPBP1Q92547 1522 aa3.52□□□□□ -1.85
CD44-223ENST00000526553 A0A1W2PQ72 361 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 ANKRD30BLA7E2S9 258 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 MEI4A8MW99 385 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 E2F3O00716 465 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 CHADO15335 359 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 KBTBD11O94819 623 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 NDUFA7O95182 113 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 THY1P04216 161 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 GSTA1P08263 222 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 TSPY4P0CV99 314 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 TSPY10P0CW01 314 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 HTR2AP28223 471 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 SOX6P35712 828 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 TRPC1P48995 793 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 NDST1P52848 882 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 PPIAP62937 165 aaKnown RBP3.51□□□□□ -1.85
CD44-223ENST00000526553 HERVK_113P63132 956 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 ERVK-8P63133 956 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 ELP6Q0PNE2 266 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 FUT7Q11130 342 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 ACSF3Q4G176 576 aaPredicted RBP3.51□□□□□ -1.85
CD44-223ENST00000526553 OLFML2AQ68BL7 652 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 REP15Q6BDI9 236 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 SLC25A24Q6NUK1 477 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 RANBP3LQ86VV4 465 aaPredicted RBP3.51□□□□□ -1.85
CD44-223ENST00000526553 CENPLQ8N0S6 344 aaPredicted RBP3.51□□□□□ -1.85
CD44-223ENST00000526553 ICA1LQ8NDH6 482 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 PNPLA2Q96AD5 504 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 DTNBP1Q96EV8 351 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 TXN2Q99757 166 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 ZNF416Q9BWM5 594 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 ERVK-6Q9BXR3 956 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 RPAP3Q9H6T3 665 aaPredicted RBP3.51□□□□□ -1.85
CD44-223ENST00000526553 ACTR8Q9H981 624 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 FARSBQ9NSD9 589 aaKnown RBP3.51□□□□□ -1.85
CD44-223ENST00000526553 TUBGCP4Q9UGJ1 667 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 LAMP5Q9UJQ1 280 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 NAALAD2Q9Y3Q0 740 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 SYNJ1O43426 1573 aa3.51□□□□□ -1.85
CD44-223ENST00000526553 TOP2AP11388 1531 aaKnown RBP3.5□□□□□ -1.85
CD44-223ENST00000526553 ABCC4O15439 1325 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 NEDD8-MDP1E9PL57 170 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 PDXKO00764 312 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 MAPK13O15264 365 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 CFLARO15519 480 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 APBB3O95704 486 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 THRBP10828 461 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 CYP2F1P24903 491 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 PTPN6P29350 595 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 AXLP30530 894 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 NPY2RP49146 381 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 TRA2BP62995 288 aaKnown RBP3.5□□□□□ -1.85
CD44-223ENST00000526553 OVGP1Q12889 678 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 KLF5Q13887 457 aaPredicted RBP3.5□□□□□ -1.85
CD44-223ENST00000526553 P2RY14Q15391 338 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 CLPPQ16740 277 aaPredicted RBP3.5□□□□□ -1.85
CD44-223ENST00000526553 ZNF528Q3MIS6 628 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 RFWD3Q6PCD5 774 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 PAQR9Q6ZVX9 377 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 GPR142Q7Z601 462 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 ITIH5Q86UX2 942 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 TBC1D21Q8IYX1 336 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 ZBED8Q8IZ13 594 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 IPMKQ8NFU5 416 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 OR10T2Q8NGX3 314 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 MRAPQ8TCY5 172 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 MRPL24Q96A35 216 aaKnown RBP3.5□□□□□ -1.85
CD44-223ENST00000526553 RAB7BQ96AH8 199 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 COG3Q96JB2 828 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 DEFB118Q96PH6 123 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 ACCSQ96QU6 501 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 JPH2Q9BR39 696 aaPredicted RBP3.5□□□□□ -1.85
CD44-223ENST00000526553 CRACR2AQ9BSW2 395 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 MIOXQ9UGB7 285 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 VSIG4Q9Y279 399 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 SLC6A5Q9Y345 797 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 FBXO7Q9Y3I1 522 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 ZNF175Q9Y473 711 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 MFHAS1Q9Y4C4 1052 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 ATG4BQ9Y4P1 393 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 POGZQ7Z3K3 1410 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 ABCC8Q09428 1581 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 DNMBPQ6XZF7 1577 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 TSPOAP1O95153 1857 aa3.5□□□□□ -1.85
CD44-223ENST00000526553 KIF7Q2M1P5 1343 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms