RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 FAM213AQ9BRX8 229 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 CABLES2Q9BTV7 478 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 UBXN6Q9BZV1 441 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 UBE2TQ9NPD8 197 aaPredicted RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 AGPAT3Q9NRZ7 376 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ARGLU1Q9NWB6 273 aaPredicted RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 NDE1Q9NXR1 346 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 SLCO1C1Q9NYB5 712 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 RBAKQ9NYW8 714 aaPredicted RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 SPG21Q9NZD8 308 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 MUTYHQ9UIF7 546 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 UBQLN1Q9UMX0 589 aaKnown RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 WIPI2Q9Y4P8 454 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ZFP37Q9Y6Q3 630 aaPredicted RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 VWA8A3KMH1 1905 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 PLXNA3P51805 1871 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 TRIP11Q15643 1979 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 SF3B1O75533 1304 aaKnown RBP eCLIP3.25□□□□□ -1.89
CD44-219ENST00000525685 PTPRJQ12913 1337 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 LOC105371242A0A075B767 164 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 A0A1B0GU03 582 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 C13orf42A0A1B0GVH6 325 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 BICDL2A1A5D9 508 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 TRIM49BA6NDI0 452 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 NKX6-3A6NJ46 265 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 HIDE1A8MVS5 230 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 PI4K2BG5E9Z4 385 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 I3L4J1 428 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 M0R296 226 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 PDXKO00764 312 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CALUO43852 315 aaPredicted RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 ACSL4O60488 711 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 MTRF1O75570 445 aaKnown RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 CEACAM4O75871 244 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 ZFAND5O76080 213 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 LETM1O95202 739 aaPredicted RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 SMC2O95347 1197 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 GSTA2P09210 222 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 THEGLP0DJG4 465 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 VDRP11473 427 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CD59P13987 128 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CYP3A5P20815 502 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 C4BPBP20851 252 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CA8P35219 290 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CAPGP40121 348 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 IER3P46695 156 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 BRCC3P46736 316 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 TAF6P49848 677 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 SNU13P55769 128 aaKnown RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 ERVK-16P61578 105 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 SNRPFP62306 86 aaKnown RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 SLC34A1Q06495 639 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CYP24A1Q07973 514 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
CD44-219ENST00000525685 ZNF177Q13360 481 aaPredicted RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 SMC1AQ14683 1233 aaKnown RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 ZBTB6Q15916 424 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 SNRNP35Q16560 246 aaKnown RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 CAMK4Q16566 473 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 MEP1BQ16820 701 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 UPP1Q16831 310 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 KRT71Q3SY84 523 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 KLHL10Q6JEL2 608 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 ALKBH5Q6P6C2 394 aaKnown RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 PODNL1Q6PEZ8 512 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CATSPERDQ86XM0 798 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CD302Q8IX05 232 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 TEX26Q8N6G2 289 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 AQP11Q8NBQ7 271 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 VN1R2Q8NFZ6 395 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 OR13C5Q8NGS8 318 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 AP2M1Q96CW1 435 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 GSDMAQ96QA5 445 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 LRRC61Q9BV99 259 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 TRIM7Q9C029 511 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 SLC39A8Q9C0K1 460 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 DNAI2Q9GZS0 605 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CLSTN2Q9H4D0 955 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 ASB7Q9H672 318 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 RMND1Q9NWS8 449 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 CGNQ9P2M7 1197 aaKnown RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 KLK11Q9UBX7 282 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 HOOK1Q9UJC3 728 aaKnown RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 LEF1Q9UJU2 399 aaPredicted RBP3.25□□□□□ -1.89
CD44-219ENST00000525685 ADAM28Q9UKQ2 775 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 TRAF3IP3Q9Y228 551 aa3.25□□□□□ -1.89
CD44-219ENST00000525685 DENND4AQ7Z401 1863 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 TRIOBPQ9H2D6 2365 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 A4D1N5 150 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 ZNF233A6NK53 670 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 LRRIQ3A6PVS8 624 aaPredicted RBP3.24□□□□□ -1.89
CD44-219ENST00000525685 MPTX1A8MV57 137 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 ZNF732B4DXR9 585 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 NPIPB9F8W1W9 429 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 PIRO00625 290 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 INPP4BO15327 924 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 ADAM12O43184 909 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 CLN5O75503 358 aa3.24□□□□□ -1.89
CD44-219ENST00000525685 AKAP3O75969 853 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms