RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PINX1Q96BK5 328 aaKnown RBP3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 VPS39Q96JC1 886 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 VPS35Q96QK1 796 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 TSPAN18Q96SJ8 248 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 HSD17B14Q9BPX1 270 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 ERP44Q9BS26 406 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 MCRIP2Q9BUT9 160 aaKnown RBP3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 UPF3AQ9H1J1 476 aaKnown RBP3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 TSPY26PQ9H489 355 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 LPAR2Q9HBW0 351 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 FAM114A2Q9NRY5 505 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 CCDC7Q96M83 1385 aa3.74□□□□□ -1.81
HMGB1P1-201ENST00000522557 MAPK13O15264 365 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 RANBP6O60518 1105 aaKnown RBP3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 TBX19O60806 448 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 RAMP1O60894 148 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 CRLF1O75462 422 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 IGSF6O95976 241 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 MELTFP08582 738 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 ANXA4P09525 319 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 FAM200BP0CF97 657 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 KRT13P13646 458 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 PAICSP22234 425 aaKnown RBP3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 PAX7P23759 505 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 CA8P35219 290 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 PTGER3P43115 390 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 HTR5AP47898 357 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 TFDP1Q14186 410 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 C9orf66Q5T8R8 295 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 SEL1L2Q5TEA6 688 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 NCR3LG1Q68D85 454 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 VASH2Q86V25 355 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 EFCAB13Q8IY85 973 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 OR2T3Q8NH03 318 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 ATF6BQ99941 703 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 FAM173AQ9BQD7 235 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 APOOQ9BUR5 198 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 TBC1D10AQ9BXI6 508 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 TEX13BQ9BXU2 312 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 STRADBQ9C0K7 418 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 POLR1EQ9GZS1 481 aaKnown RBP3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 TUBB1Q9H4B7 451 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 RIBC2Q9H4K1 309 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 RMND5AQ9H871 391 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 MEAF6Q9HAF1 191 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 IL1RL2Q9HB29 575 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 TBK1Q9UHD2 729 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 ATP6V1HQ9UI12 483 aa3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 ZNF346Q9UL40 294 aaKnown RBP3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 EXOSC1Q9Y3B2 195 aaKnown RBP3.73□□□□□ -1.81
HMGB1P1-201ENST00000522557 IGHV3OR16-12A0A075B7B8 117 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 IGKV3D-20A0A0C4DH25 116 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 ASB14A6NK59 587 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 TMCO5BA8MYB1 307 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 NPIPA2E9PIF3 369 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 XPO1O14980 1071 aaKnown RBP3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 EFNA2O43921 213 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 SDC3O75056 442 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 NEBLO76041 1014 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 UFL1O94874 794 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 MFN2O95140 757 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 PRAMEF12O95522 483 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 PCCBP05166 539 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 WNT2P09544 360 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 CPN1P15169 458 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 NT5EP21589 574 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 HNRNPA2B1P22626 353 aaKnown RBP3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 SNTB2Q13425 540 aaKnown RBP3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 TRIP10Q15642 601 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 SLC36A3Q495N2 470 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 NADK2Q4G0N4 442 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 TMEM52BQ4KMG9 183 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 VWA2Q5GFL6 755 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 SPATA46Q5T0L3 261 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 AGAP7PQ5VUJ5 663 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 FAAP20Q6NZ36 180 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 CCBE1Q6UXH8 406 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 STAC2Q6ZMT1 411 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 ZDHHC21Q8IVQ6 265 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 SUMF1Q8NBK3 374 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 CSNK1G2-AS1Q8NCQ2 148 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 STEAP2Q8NFT2 490 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 ANKRD9Q96BM1 317 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 SLC45A3Q96JT2 553 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 LINC00479Q96M42 142 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 RPP25Q9BUL9 199 aaKnown RBP3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 TPPP3Q9BW30 176 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 CARD6Q9BX69 1037 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 RPAP3Q9H6T3 665 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 RDH8Q9NYR8 311 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 GTSE1Q9NYZ3 720 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 NUDT4Q9NZJ9 180 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 DHRS7Q9Y394 339 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 FBXO7Q9Y3I1 522 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 PRSS21Q9Y6M0 314 aa3.72□□□□□ -1.81
HMGB1P1-201ENST00000522557 UNC13AQ9UPW8 1703 aa3.71□□□□□ -1.82
HMGB1P1-201ENST00000522557 CXCL11O14625 94 aa3.71□□□□□ -1.82
HMGB1P1-201ENST00000522557 IDH1O75874 414 aaKnown RBP3.71□□□□□ -1.82
HMGB1P1-201ENST00000522557 PDE5AO76074 875 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms