RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 ADAM12O43184 909 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 IDH3BO43837 385 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SSX4O60224 188 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CACNG3O60359 315 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 UGT1A9O60656 530 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 MAGEC1O60732 1142 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 ZWINTO95229 277 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 AP2A1O95782 977 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TBX18O95935 607 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 MOCS2O96007 188 aaPredicted RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 IGLV3-27P01718 113 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 VIMP08670 466 aaKnown RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 HAPLN1P10915 354 aaPredicted RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 ACADMP11310 421 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TAC1P20366 129 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CCR1P32246 355 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 FOXN2P32314 431 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 RPA3P35244 121 aaPredicted RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TSPAN7P41732 249 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CCL23P55773 120 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 PRAMEP78395 509 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CRADDP78560 199 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 IL9RQ01113 521 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 ZNF33AQ06730 810 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 PEX6Q13608 980 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 ZKSCAN8Q15776 578 aaPredicted RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 PDK4Q16654 411 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TEX44Q53QW1 395 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SLC25A30Q5SVS4 291 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CGB2Q6NT52 195 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 PRSS55Q6UWB4 352 aaPredicted RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 FAM43BQ6ZT52 329 aaPredicted RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 PID1Q7Z2X4 250 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 PIGWQ7Z7B1 504 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SLC26A11Q86WA9 606 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 ZNF683Q8IZ20 524 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 LRRC43Q8N309 656 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 ARHGAP18Q8N392 663 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 RTL3Q8N8U3 475 aaKnown RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 BANPQ8N9N5 519 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 PPFIBP2Q8ND30 876 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CCNYQ8ND76 341 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SPPL2BQ8TCT7 592 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 DYDC1Q8WWB3 177 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 ARNTL2Q8WYA1 636 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 FBXO32Q969P5 355 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CELF6Q96J87 481 aaKnown RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SERAC1Q96JX3 654 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SPATA17Q96L03 361 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 MAGEB18Q96M61 343 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SERPINB11Q96P15 392 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TSGA13Q96PP4 275 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 OR6C1Q96RD1 312 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TGS1Q96RS0 853 aaKnown RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CYTH2Q99418 400 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 VAT1Q99536 393 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 FERMT1Q9BQL6 677 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 MLPHQ9BV36 600 aaPredicted RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 MRPL9Q9BYD2 267 aaKnown RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SLC39A8Q9C0K1 460 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 NSRP1Q9H0G5 558 aaKnown RBP3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 FBXO44Q9H4M3 255 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 CWH43Q9H720 699 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 UGT1A7Q9HAW7 530 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 UGT1A10Q9HAW8 530 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 UGT1A8Q9HAW9 530 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SPHK2Q9NRA0 654 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 FGFR1OP2Q9NVK5 253 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 NKIRAS1Q9NYS0 192 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 SLC17A7Q9P2U7 560 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 MTRRQ9UBK8 725 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TBX21Q9UL17 535 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 FAM169AQ9Y6X4 670 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 IGLV3-10A0A075B6K4 115 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 HYKKA2RU49 373 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 ARHGAP42A6NI28 874 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SDR42E2A6NKP2 422 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 C15orf61A6NNL5 157 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 HEPACAM2A8MVW5 462 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 MYO1GB0I1T2 1018 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 TRIM49D1C9J1S8 452 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 GOLGA8RI6L899 631 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 DFFAO00273 331 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 TM9SF1O15321 606 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SNX3O60493 162 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 EDF1O60869 148 aaKnown RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 MT-ND3P03897 115 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 HLA-DQB2P05538 268 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SNRPAP09012 282 aaKnown RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 ZDHHC11BP0C7U3 371 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 IGHV4-31P0DP07 118 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SLC2A3P11169 496 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 LAMP2P13473 410 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 PGAM1P18669 254 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 ATF6P18850 670 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CCNCP24863 283 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SERPINB9P50453 376 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SUOXP51687 545 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 PDX1P52945 283 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms