RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 RIIAD1A6NNX1 92 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 PLRG1O43660 514 aaKnown RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 COL9A1P20849 921 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 ELAVL4P26378 380 aaKnown RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 TRIM23P36406 574 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 RABIFP47224 123 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 SLC9A3P48764 834 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 POU6F2P78424 691 aaPredicted RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 KRR1Q13601 381 aaKnown RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 SOWAHCQ53LP3 525 aaPredicted RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 PLAG1Q6DJT9 500 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 XAF1Q6GPH4 301 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 SLC48A1Q6P1K1 146 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 IGFN1Q86VF2 1251 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 SLC22A16Q86VW1 577 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 OR51G2Q8NGK0 314 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 GATAD2BQ8WXI9 593 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 SH3YL1Q96HL8 342 aaPredicted RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 DGAT2Q96PD7 388 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 SERINC2Q96SA4 455 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 CD180Q99467 661 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 TMED9Q9BVK6 235 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 TTTY10Q9BZA0 68 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 EGLN3Q9H6Z9 239 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 KIR3DX1Q9H7L2 352 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 A4GALTQ9NPC4 353 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 COMMD3Q9UBI1 195 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 SLC35F4A4IF30 521 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 PRAMEF26H0Y7S4 382 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 STX11O75558 287 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 LINC00271P0C7V0 271 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 GNSP15586 552 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 LIPAP38571 399 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 GCGRP47871 477 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 GIPRP48546 466 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 PDE7AQ13946 482 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 ERV3-1Q14264 604 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 RSBN1Q5VWQ0 802 aaPredicted RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 TRIQKQ629K1 86 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 USP53Q70EK8 1073 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 OR5T3Q8NGG3 340 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 ZNF563Q8TA94 476 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 ZDHHC1Q8WTX9 485 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 ELP4Q96EB1 424 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 HDHD2Q9H0R4 259 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 C6orf106Q9H6K1 298 aaPredicted RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 MTHFD2LQ9H903 347 aaPredicted RBP9.55□□□□□ -0.88
MCF2-209ENST00000520602 CLEC4AQ9UMR7 237 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 SLC17A4Q9Y2C5 497 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 CARD8Q9Y2G2 431 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 IFT52Q9Y366 437 aa9.55□□□□□ -0.88
MCF2-209ENST00000520602 MAN2B1O00754 1011 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 HMGN1P05114 100 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 CELP19835 753 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 MRPS21P82921 87 aaKnown RBP9.54□□□□□ -0.88
MCF2-209ENST00000520602 ELOAQ14241 798 aaKnown RBP9.54□□□□□ -0.88
MCF2-209ENST00000520602 ZNF57Q68EA5 555 aaPredicted RBP9.54□□□□□ -0.88
MCF2-209ENST00000520602 FAHD1Q6P587 224 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 ZNF367Q7RTV3 350 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 OR9A4Q8NGU2 314 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 UFD1Q92890 307 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 DNAJA3Q96EY1 480 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 MS4A4EQ96PG1 132 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 OR5M11Q96RB7 305 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 GPATCH2Q9NW75 528 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 NLGN3Q9NZ94 848 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 TNFRSF10DQ9UBN6 386 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 IRGMA1A4Y4 181 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 SLC9B1P1A6NJY1 282 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 OR5K4A6NMS3 321 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 K7EQS6 105 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 FCMRO60667 390 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 APBB3O95704 486 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 TALDO1P37837 337 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 LIM2P55344 173 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 SLC36A4Q6YBV0 504 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
MCF2-209ENST00000520602 Q8N9G6 341 aaPredicted RBP9.54□□□□□ -0.88
MCF2-209ENST00000520602 GOT1L1Q8NHS2 421 aaPredicted RBP9.54□□□□□ -0.88
MCF2-209ENST00000520602 OSTF1Q92882 214 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 SLC41A3Q96GZ6 507 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 GABARAPL1Q9H0R8 117 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 ZNF576Q9H609 170 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 LMAN1LQ9HAT1 526 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 CD93Q9NPY3 652 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 SLC7A7Q9UM01 511 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 MED31Q9Y3C7 131 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 CSNK1G3Q9Y6M4 447 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 CACNA1CQ13936 2221 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 LOC105369274A0A096LPK9 316 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 LOC102723532A0A0G2JNH3 316 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 DAPL1A0PJW8 107 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 SH3D21A4FU49 640 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 NPIPB8E9PQR5 432 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 SNPHO15079 494 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 FUCA1P04066 466 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 ADORA3P0DMS8 318 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 BMP8BP34820 402 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms