RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ZNF789Q5FWF6 425 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 LGSNQ5TDP6 509 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 PRAMEF8Q5VWM4 474 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 C11orf88Q6PI97 169 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 HSD17B13Q7Z5P4 300 aaPredicted RBP2.63□□□□□ -1.99
SKP1-207ENST00000520417 SYCP3Q8IZU3 236 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 SIDT2Q8NBJ9 832 aaKnown RBP2.63□□□□□ -1.99
SKP1-207ENST00000520417 OR4A16Q8NH70 328 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 GDAP1Q8TB36 358 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 ANKRD49Q8WVL7 239 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 PLEKHF1Q96S99 279 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 CTRCQ99895 268 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 GLT8D2Q9H1C3 349 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 ALG9Q9H6U8 611 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 EXOSC3Q9NQT5 275 aaKnown RBP2.63□□□□□ -1.99
SKP1-207ENST00000520417 ABCB8Q9NUT2 735 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 ACOXLQ9NUZ1 547 aa2.63□□□□□ -1.99
SKP1-207ENST00000520417 A4D1N5 150 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 CACNB4O00305 520 aaPredicted RBP2.62□□□□□ -1.99
SKP1-207ENST00000520417 ABCD4O14678 606 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 ZNF254O75437 659 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 ECDO95905 644 aaPredicted RBP2.62□□□□□ -1.99
SKP1-207ENST00000520417 HOXB7P09629 217 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 TOP1P11387 765 aaKnown RBP2.62□□□□□ -1.99
SKP1-207ENST00000520417 FERP16591 822 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 SDC1P18827 310 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 MUTP22033 750 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 ATP5DP30049 168 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 NF2P35240 595 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 MEP1BQ16820 701 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 ATRAIDQ6UW56 229 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 DCAF4L2Q8NA75 395 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 BBS1Q8NFJ9 593 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 ZNF721Q8TF20 911 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 CFAP36Q96G28 342 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 NICN1Q9BSH3 213 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 TM2D1Q9BX74 207 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 ZNF350Q9GZX5 532 aa2.62□□□□□ -1.99
SKP1-207ENST00000520417 ZNF223Q9UK11 482 aaPredicted RBP2.62□□□□□ -1.99
SKP1-207ENST00000520417 BARX2Q9UMQ3 279 aaPredicted RBP2.62□□□□□ -1.99
SKP1-207ENST00000520417 ATP6V1G1O75348 118 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 CCNE1P24864 410 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 SNU13P55769 128 aaKnown RBP2.61□□□□□ -1.99
SKP1-207ENST00000520417 TIMM10P62072 90 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 NOP14P78316 857 aaKnown RBP2.61□□□□□ -1.99
SKP1-207ENST00000520417 RCN2Q14257 317 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 MPPED2Q15777 294 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 PRR4Q16378 134 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 CLPPQ16740 277 aaPredicted RBP2.61□□□□□ -1.99
SKP1-207ENST00000520417 EPC2Q52LR7 807 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 CCDC91Q7Z6B0 441 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 IQCA1Q86XH1 822 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 C9orf40Q8IXQ3 194 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 KIR2DL5BQ8NHK3 375 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 RAB39BQ96DA2 213 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 IL4I1Q96RQ9 567 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 CCSER1Q9C0I3 900 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 ABCG8Q9H221 673 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 MMADHCQ9H3L0 296 aaPredicted RBP2.61□□□□□ -1.99
SKP1-207ENST00000520417 MAGEF1Q9HAY2 307 aa2.61□□□□□ -1.99
SKP1-207ENST00000520417 ZCCHC3Q9NUD5 404 aaKnown RBP2.61□□□□□ -1.99
SKP1-207ENST00000520417 NOL7Q9UMY1 257 aaKnown RBP2.61□□□□□ -1.99
SKP1-207ENST00000520417 IGKV2D-24A0A075B6R9 120 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.6□□□□□ -1.99
SKP1-207ENST00000520417 ZNF263O14978 683 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 SLC7A4O43246 635 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 SDC3O75056 442 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 FOXH1O75593 365 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 CTNNB1P35222 781 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 TCF7P36402 384 aaPredicted RBP2.6□□□□□ -1.99
SKP1-207ENST00000520417 RPL32P62910 135 aaKnown RBP2.6□□□□□ -1.99
SKP1-207ENST00000520417 SLMAPQ14BN4 828 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 CAMK4Q16566 473 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 SULT1C3Q6IMI6 304 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 LINC00696Q6ZRV3 163 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 KCTD9Q7L273 389 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 ZNF100Q8IYN0 542 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 CCDC170Q8IYT3 715 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 SRSF12Q8WXF0 261 aaKnown RBP2.6□□□□□ -1.99
SKP1-207ENST00000520417 DCUN1D4Q92564 292 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 VMP1Q96GC9 406 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 ACCSQ96QU6 501 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 DESI2Q9BSY9 194 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 ABCG4Q9H172 646 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 ARGLU1Q9NWB6 273 aaPredicted RBP2.6□□□□□ -1.99
SKP1-207ENST00000520417 ELOVL2Q9NXB9 296 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 LEF1Q9UJU2 399 aaPredicted RBP2.6□□□□□ -1.99
SKP1-207ENST00000520417 ENTPD4Q9Y227 616 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 GTF3C1Q12789 2109 aa2.6□□□□□ -1.99
SKP1-207ENST00000520417 ZNFX1Q9P2E3 1918 aaKnown RBP2.6□□□□□ -1.99
SKP1-207ENST00000520417 ANP32DO95626 131 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 IGSF6O95976 241 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 PGK2P07205 417 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 MAT2AP31153 395 aaKnown RBP2.59□□□□□ -1.99
SKP1-207ENST00000520417 ASIC1P78348 528 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 TLE4Q04727 773 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 TYSND1Q2T9J0 566 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 SMU1Q2TAY7 513 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 HIST2H2AA3Q6FI13 130 aa2.59□□□□□ -1.99
SKP1-207ENST00000520417 UFSP1Q6NVU6 142 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms