RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CYLC2Q14093 348 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 RCN1Q15293 331 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 DUSP5Q16690 384 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 MOGAT2Q3SYC2 334 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 CES4AQ5XG92 561 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 TATDN1Q6P1N9 297 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 CASC4Q6P4E1 433 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 SHQ1Q6PI26 577 aaKnown RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 CROCCP2Q86T23 111 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 HOOK3Q86VS8 718 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 CROCCP3Q8IVE0 287 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 KLHL7Q8IXQ5 586 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF440Q8IYI8 595 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLC7A5P1Q8MH63 180 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ALLCQ8N6M5 410 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 METTL13Q8N6R0 699 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 TCEANCQ8N8B7 351 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ATAD1Q8NBU5 361 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 PYROXD1Q8WU10 500 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 CHPT1Q8WUD6 406 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 GIMAP1Q8WWP7 306 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 STARD8Q92502 1023 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 EFHD2Q96C19 240 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF689Q96CS4 500 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 NXPE2Q96DL1 559 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 OMA1Q96E52 524 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 SGF29Q96ES7 293 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 LURAP1Q96LR2 239 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 MAGEB18Q96M61 343 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF641Q96N77 438 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 BIRC8Q96P09 236 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 RANBP9Q96S59 729 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 IL12RB2Q99665 862 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 CTRCQ99895 268 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 HSD17B14Q9BPX1 270 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 RBM4BQ9BQ04 359 aaKnown RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ECSITQ9BQ95 431 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 SIKE1Q9BRV8 207 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 CENPKQ9BS16 269 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ALKBH7Q9BT30 221 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 PI4K2AQ9BTU6 479 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 IDI2Q9BXS1 227 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ROPN1BQ9BZX4 212 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 NSRP1Q9H0G5 558 aaKnown RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 PSTPIP2Q9H939 334 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 ROPN1Q9HAT0 212 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 B3GAT2Q9NPZ5 323 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 DMAC2Q9NW81 257 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLCO1C1Q9NYB5 712 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 N6AMT1Q9Y5N5 214 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 COLEC10Q9Y6Z7 277 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 COL4A1P02462 1669 aa2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 COL16A1Q07092 1604 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P41-201ENST00000520234 BAZ2AQ9UIF9 1905 aaKnown RBP2.78□□□□□ -1.97
HMGB1P41-201ENST00000520234 MAST2Q6P0Q8 1798 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 KIAA1551Q9HCM1 1747 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 FRMPD4Q14CM0 1322 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ADGRA3Q8IWK6 1321 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 A0A087WZ39 114 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMEM120BA0PK00 339 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 MEX3AA1L020 520 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ILVBLA1L0T0 632 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 FUOMA2VDF0 154 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SDR42E2A6NKP2 422 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 A8MXQ7 604 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 KBTBD13C9JR72 458 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF701M0R085 212 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 TFECO14948 347 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 LSM1O15116 133 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 CETN3O15182 167 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 MAPK13O15264 365 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 RIPK2O43353 540 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SCO2O43819 266 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC37A4O43826 429 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SELENOFO60613 162 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 EDF1O60869 148 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SULT1C4O75897 302 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 GH1P01241 217 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANKRD34CP0C6C1 535 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 UBTFL6P0CB48 400 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SP9P0CG40 484 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 GOLGA8HP0CJ92 632 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 KRT5P13647 590 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 GAP43P17677 238 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 VCLP18206 1134 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 S100A1P23297 94 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 TLX1P31314 330 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 RFC4P35249 363 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ACADSBP45954 432 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 IER3P46695 156 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 NPBWR1P48145 328 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 BCAP31P51572 246 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 HADHBP55084 474 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ARPC4P59998 168 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ACTR3P61158 418 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SNRPFP62306 86 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ENPEPQ07075 957 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 CETN1Q12798 172 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms