RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SPAG4Q9NPE6 437 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 HPS4Q9NQG7 708 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 PAPOLBQ9NRJ5 636 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 CMTM6Q9NX76 183 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 WWOXQ9NZC7 414 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 ADA2Q9NZK5 511 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 PKD2L2Q9NZM6 624 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 NDRG3Q9UGV2 375 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 RAPGEFL1Q9UHV5 662 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 PSMD13Q9UNM6 376 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 PDE10AQ9Y233 779 aa4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 POLR3HQ9Y535 204 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 NUP210Q8TEM1 1887 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-212ENST00000518919 MTCL1Q9Y4B5 1905 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 TCRBV3S1A0A5B6 114 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ANTXRLA6NF34 631 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 TMEM202A6NGA9 273 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ARHGEF33A8MVX0 844 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 NPIPB8E9PQR5 432 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 K7EPI3 171 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 PLK4O00444 970 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 MANBAO00462 879 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF197O14709 1029 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SLC9A3R1O14745 358 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ADAMDEC1O15204 470 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 NARSO43776 548 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 FOXD2O60548 495 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 RNASEH1O60930 286 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 EEDO75530 441 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 RSL1D1O76021 490 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 AP2A2O94973 939 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 OTCP00480 354 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 OR56A5P0C7T3 313 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 HLA-EP13747 358 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ATP1B2P14415 290 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 MMP9P14780 707 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 TCN1P20061 433 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ANXA7P20073 488 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 AGAP20933 346 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 CTSCP53634 463 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 CDKL1Q00532 357 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 FOXM1Q08050 763 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 TRAP1Q12931 704 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 GPM6BQ13491 265 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 CAMK2DQ13557 499 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 NAE1Q13564 534 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SNTB1Q13884 538 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 KCNC3Q14003 757 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SELPLGQ14242 412 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ABRAXAS2Q15018 415 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 KIAA0040Q15053 153 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 TRIP10Q15642 601 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 MMEL1Q495T6 779 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 GGTA1PQ4G0N0 100 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SOWAHCQ53LP3 525 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 FBLN7Q53RD9 439 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF805Q5CZA5 627 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 IGSF11Q5DX21 431 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF628Q5EBL2 1059 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 PAGE3Q5JUK9 113 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 CDKL4Q5MAI5 379 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SAMD4BQ5PRF9 694 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 IRAK1BP1Q5VVH5 260 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ZDHHC20Q5W0Z9 365 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 METTL2BQ6P1Q9 378 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ZFP1Q6P2D0 407 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 NEK5Q6P3R8 708 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ZNF813Q6ZN06 617 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 GET4Q7L5D6 327 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 LRRC70Q7Z2Q7 622 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 RBM23Q86U06 439 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SPATA24Q86W54 205 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ZFAND4Q86XD8 727 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 MMP21Q8N119 569 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 OR8H3Q8N146 312 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 PARP16Q8N5Y8 322 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 FNDC5Q8NAU1 212 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 PPFIBP2Q8ND30 876 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 OR14L1PQ8NHC6 308 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SLCO4A1Q96BD0 722 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 OTULINQ96BN8 352 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SPDL1Q96EA4 605 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 CHFRQ96EP1 664 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 DTD2Q96FN9 168 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 ZFYVE19Q96K21 471 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 HARBI1Q96MB7 349 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 GBP5Q96PP8 586 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 PKP2Q99959 881 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 RIOK2Q9BVS4 552 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SPATA16Q9BXB7 569 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SLC29A3Q9BZD2 475 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 EBF3Q9H4W6 596 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 MVB12BQ9H7P6 319 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 IL1RL2Q9HB29 575 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 PNRC2Q9NPJ4 139 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 FARSBQ9NSD9 589 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 DUS2Q9NX74 493 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 SELENONQ9NZV5 590 aa4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 C6orf203Q9P0P8 240 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-212ENST00000518919 OPTCQ9UBM4 332 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms