RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 TMEM145Q8NBT3 493 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 ING5Q8WYH8 240 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 UPRTQ96BW1 309 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 NECTIN4Q96NY8 510 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 ZNF649Q9BS31 505 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 LGR4Q9BXB1 951 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 SEMA4GQ9NTN9 838 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 GIMAP4Q9NUV9 329 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 RBFOX1Q9NWB1 397 aaKnown RBP15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 NLKQ9UBE8 527 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 CLCA2Q9UQC9 943 aa15.56■□□□□ 0.08
PCDHGA11-202ENST00000518882 PGRMC2O15173 223 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 HCN1O60741 890 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ERAL1O75616 437 aaKnown RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 DDX6P26196 483 aaKnown RBP eCLIP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 AVPR1BP47901 424 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 TAS2R41P59536 307 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CSNK1G2P78368 415 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 IL18Q14116 193 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ARHGAP19Q14CB8 494 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CLPPQ16740 277 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ARHGAP15Q53QZ3 475 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 SLC30A6Q6NXT4 461 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 FAM20CQ8IXL6 584 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 TCTE3Q8IZS6 198 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 C19orf18Q8NEA5 215 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 OR4Q3Q8NH05 313 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 SUN3Q8TAQ9 357 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 C17orf50Q8WW18 174 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 POLMQ9NP87 494 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 LIPT1Q9Y234 373 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 TRPM6Q9BX84 2022 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CPSF4LA6NMK7 179 aaKnown RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ERVH48-1M5A8F1 160 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 MAN2B1O00754 1011 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CPNE3O75131 537 aaKnown RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 FGBP02675 491 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 LINC00271P0C7V0 271 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 GNSP15586 552 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CELP19835 753 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 TRHRP34981 398 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 EVX1P49640 407 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CDH11P55287 796 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 TAS2R38P59533 333 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ERVFC1P60507 584 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CHRNEQ04844 493 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 TSPAN31Q12999 210 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ZNF791Q3KP31 576 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 VASNQ6EMK4 673 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 SYCE2Q6PIF2 218 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ADCK2Q7Z695 626 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 VRK2Q86Y07 508 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 MARCH9Q86YJ5 346 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 SFTPA1Q8IWL2 248 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CCDC116Q8IYX3 515 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 POGLUT1Q8NBL1 392 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 BBS1Q8NFJ9 593 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 GNPDA2Q8TDQ7 276 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ZC3HAV1LQ96H79 300 aaKnown RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 SLC38A2Q96QD8 506 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 SPATA5L1Q9BVQ7 753 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 RPRD1BQ9NQG5 326 aaKnown RBP15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 ADAM29Q9UKF5 820 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 NTNG1Q9Y2I2 539 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 CHST2Q9Y4C5 530 aa15.55■□□□□ 0.08
PCDHGA11-202ENST00000518882 DENND4AQ7Z401 1863 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 A0A0G2JMP0 313 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 C2orf92A0A1B0GVN3 265 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 IRGMA1A4Y4 181 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 LRIT2A6NDA9 550 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 SNTNA6NMZ2 147 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 GABRPO00591 440 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 C8orf89P0DMQ9 161 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 ACP5P13686 325 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 HOXB3P14651 431 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 TRIM23P36406 574 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 OMPP47874 163 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 FAPQ12884 760 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 RPA4Q13156 261 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 FZD5Q13467 585 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 CAMK2BQ13554 666 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 PIP5KL1Q5T9C9 394 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 TMEM107Q6UX40 140 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 CADM2Q8N3J6 435 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 DUSP18Q8NEJ0 188 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 JPH3Q8WXH2 748 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 CNRIP1Q96F85 164 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 COX14Q96I36 57 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 BBS4Q96RK4 519 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 PINK1Q9BXM7 581 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 RNF32Q9H0A6 362 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 IL20RAQ9UHF4 553 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 ABHD14A-ACY1A0A1B0GW23 586 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 CD8B2A6NJW9 211 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 CASC3O15234 703 aaKnown RBP15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 LYRM1O43325 122 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 CD8BP10966 210 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 DRD2P14416 443 aa15.54■□□□□ 0.08
PCDHGA11-202ENST00000518882 CCDC58Q4VC31 144 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms