RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 MAP3K8P41279 467 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 SNRPNP63162 240 aaKnown RBP10.04□□□□□ -0.8
CPEB4-203ENST00000517880 SLC35A2P78381 396 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 GPLD1P80108 840 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 IGLV3-21P80748 117 aaPredicted RBP10.04□□□□□ -0.8
CPEB4-203ENST00000517880 MGAT2Q10469 447 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 ST3GAL3Q11203 375 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 GRM7Q14831 915 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 NR1D2Q14995 579 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 NPTX1Q15818 432 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 TRMT12Q53H54 448 aaKnown RBP10.04□□□□□ -0.8
CPEB4-203ENST00000517880 PRSS48Q7RTY5 328 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 PRSS41Q7RTY9 318 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 KMT5CQ86Y97 462 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 CLVS1Q8IUQ0 354 aaPredicted RBP10.04□□□□□ -0.8
CPEB4-203ENST00000517880 ENTHD1Q8IYW4 607 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 ZNF619Q8N2I2 560 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 OR9Q2Q8NGE9 314 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 OR5T3Q8NGG3 340 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 OR4D11Q8NGI4 311 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 OR9A4Q8NGU2 314 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 CNIH3Q8TBE1 160 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 SLC9A6Q92581 669 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 HOXB13Q92826 284 aaPredicted RBP10.04□□□□□ -0.8
CPEB4-203ENST00000517880 CDS1Q92903 461 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 MYDGFQ969H8 173 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 SLC38A4Q969I6 547 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 RBM18Q96H35 190 aaKnown RBP10.04□□□□□ -0.8
CPEB4-203ENST00000517880 SDF2Q99470 211 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 BCL7BQ9BQE9 202 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 RSPO3Q9BXY4 272 aaPredicted RBP10.04□□□□□ -0.8
CPEB4-203ENST00000517880 FANCEQ9HB96 536 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 STARD5Q9NSY2 213 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 RLIMQ9NVW2 624 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 IMPAD1Q9NX62 359 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 MAT2BQ9NZL9 334 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 SEMA5BQ9P283 1151 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 RHCGQ9UBD6 479 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 RNF6Q9Y252 685 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 WDR45Q9Y484 360 aa10.04□□□□□ -0.8
CPEB4-203ENST00000517880 SCN3AQ9NY46 2000 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 TRBV4-1A0A0J9YWV2 114 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 ZAR1LA6NP61 321 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 FAM227AF5H4B4 570 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 AP3D1O14617 1153 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 B4GAT1O43505 415 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 FOXS1O43638 330 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 RGS10O43665 173 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 OR10H3O60404 316 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 TRMUO75648 421 aaKnown RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 CYP7B1O75881 506 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 CCNYL3P0C7X3 344 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 ACP2P11117 423 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 EPHA2P29317 976 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 FMO3P31513 532 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 CTSKP43235 329 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 ARRB1P49407 418 aaPredicted RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 PPM1FP49593 454 aaPredicted RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 HSD17B7P56937 341 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 POU6F2P78424 691 aaPredicted RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 DYNC1I2Q13409 638 aaKnown RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 SERTAD2Q14140 314 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 TRAM2Q15035 370 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 PTGES3Q15185 160 aaKnown RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 ZNHIT3Q15649 155 aaPredicted RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 NEDD8Q15843 81 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 DUSP5Q16690 384 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 YOD1Q5VVQ6 348 aaPredicted RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 XAF1Q6GPH4 301 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 TYW3Q6IPR3 259 aaKnown RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 KLHL17Q6TDP4 642 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 FRRS1Q6ZNA5 592 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 WDR5BQ86VZ2 330 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 RBM45Q8IUH3 476 aaKnown RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 LACC1Q8IV20 430 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 ZNF540Q8NDQ6 660 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 TMEM52Q8NDY8 209 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 OR6T1Q8NGN1 323 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 FAM81AQ8TBF8 368 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 GNPDA2Q8TDQ7 276 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 FCGR1BQ92637 280 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 MUL1Q969V5 352 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 ISOC1Q96CN7 298 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 MVB12AQ96EY5 273 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 Q96MT0 163 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 TGM7Q96PF1 710 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 ZNF350Q9GZX5 532 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 PRTFDC1Q9NRG1 225 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 SOHLH2Q9NX45 425 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 FTSJ1Q9UET6 329 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 SUSD2Q9UGT4 822 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 NDOR1Q9UHB4 597 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 CDC14AQ9UNH5 594 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 ZNF443Q9Y2A4 671 aaPredicted RBP10.03□□□□□ -0.8
CPEB4-203ENST00000517880 RNF215Q9Y6U7 377 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 CCDC88CQ9P219 2028 aa10.03□□□□□ -0.8
CPEB4-203ENST00000517880 A0A0A6YYC8 382 aaPredicted RBP10.02□□□□□ -0.81
CPEB4-203ENST00000517880 IGHV5-51A0A0C4DH38 117 aa10.02□□□□□ -0.81
CPEB4-203ENST00000517880 SYNDIG1LA6NDD5 238 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms