RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 EML6Q6ZMW3 1958 aa9.54□□□□□ -0.88
HMGXB3-205ENST00000514469 A0A087WV62 115 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 HSPB2A8KAH6 182 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 COQ9O75208 318 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 NME6O75414 186 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 EPPINO95925 133 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 IFI6P09912 130 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 NUDT17P0C025 328 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 CAPN3P20807 821 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 NTSP30990 170 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 CEACAM8P31997 349 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 TIMP3P35625 211 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 MC3RP41968 323 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 NCBP2P52298 156 aaKnown RBP eCLIP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 C2orf80Q0P641 193 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 ZNF155Q12901 538 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 EFR3AQ14156 821 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 KIAA0040Q15053 153 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 HSPB2Q16082 182 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 WIPI1Q5MNZ9 446 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 NSUN5P2Q63ZY6 315 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 CLEC6AQ6EIG7 209 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 NOXRED1Q6NXP6 359 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 C10orf107Q8IVU9 208 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 CLYBLQ8N0X4 340 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 OR2L13Q8N349 312 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 RIBC1Q8N443 379 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 WDSUB1Q8N9V3 476 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 RELL2Q8NC24 303 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 ABTB1Q969K4 478 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 ZNF764Q96H86 408 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 WDYHV1Q96HA8 205 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 FCRL1Q96LA6 429 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 BBS4Q96RK4 519 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 OR2B2Q9GZK3 357 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 SLC24A3Q9HC58 644 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 SERHLQ9NQF3 203 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 MIEF1Q9NQG6 463 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 RRAGDQ9NQL2 400 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 TAS2R9Q9NYW1 312 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 KCNN3Q9UGI6 736 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 C19orf53Q9UNZ5 99 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 MAPRE3Q9UPY8 281 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 WIF1Q9Y5W5 379 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 PTGDR2Q9Y5Y4 395 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 CACNA1CQ13936 2221 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 CACNA1DQ01668 2161 aa9.53□□□□□ -0.88
HMGXB3-205ENST00000514469 ZNF407Q9C0G0 2248 aa9.52□□□□□ -0.88
HMGXB3-205ENST00000514469 GTF3C1Q12789 2109 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 C2orf72A6NCS6 295 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 MBD3L4A6NDZ8 208 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 MBD3L3A6NE82 208 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 MBD3L5A6NJ08 208 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 PLOD2O00469 737 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 REM1O75628 298 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 CBR3O75828 277 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 ACTL6AO96019 429 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 JUNP05412 331 aaKnown RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 IL12BP29460 328 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 KRT20P35900 424 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 PNLIPRP2P54317 469 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 GAS1P54826 345 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 GFRA1P56159 465 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 DLX5P56178 289 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 WNT3P56703 355 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 VSNL1P62760 191 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 PSG6Q00889 435 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 TOMM20Q15388 145 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 SF3B4Q15427 424 aaKnown RBP eCLIP9.52□□□□□ -0.891e-6■■■■□ 20.9
HMGXB3-205ENST00000514469 KANK2Q63ZY3 851 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 POMZP3Q6PJE2 187 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 TMEM107Q6UX40 140 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 LARP4Q71RC2 724 aaKnown RBP eCLIP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 WDR53Q7Z5U6 358 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 YRDCQ86U90 279 aaKnown RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 CDH24Q86UP0 819 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 TRABD2AQ86V40 505 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 PLCZ1Q86YW0 608 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 SLC44A2Q8IWA5 706 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 BANPQ8N9N5 519 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 TNIP2Q8NFZ5 429 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 OR4N2Q8NGD1 307 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 OR2W6PQ8NHA6 318 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 MBD3L2Q8NHZ7 208 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 AMDHD1Q96NU7 426 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 ADOQ96SZ5 270 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 SH3GL2Q99962 352 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 TRMOQ9BU70 441 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 GATA5Q9BWX5 397 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 GLIPR2Q9H4G4 154 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 C1orf109Q9NX04 203 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 LGALS13Q9UHV8 139 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 CAMK2AQ9UQM7 478 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 L3MBTL1Q9Y468 752 aa9.52□□□□□ -0.89
HMGXB3-205ENST00000514469 HCFC1P51610 2035 aa9.51□□□□□ -0.89
HMGXB3-205ENST00000514469 CD8B2A6NJW9 211 aa9.51□□□□□ -0.89
HMGXB3-205ENST00000514469 B4DXG7 233 aa9.51□□□□□ -0.89
HMGXB3-205ENST00000514469 UPK1AO00322 258 aa9.51□□□□□ -0.89
HMGXB3-205ENST00000514469 SLC28A1O00337 649 aa9.51□□□□□ -0.89
HMGXB3-205ENST00000514469 DVL2O14641 736 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms