RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 CD6P30203 668 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 SMSP52788 366 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 OC90Q02509 493 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 NUP54Q7Z3B4 507 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 OR4K14Q8NGD5 310 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 PHOSPHO1Q8TCT1 267 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 PELOQ9BRX2 385 aaKnown RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 LOC285095A0A1B0GVY8 99 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 SDC3O75056 442 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 HOXD9P28356 352 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 DAPP51397 102 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 ASAH1Q13510 395 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 NRROSQ86YC3 692 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 OR4N5Q8IXE1 308 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 GPR150Q8NGU9 434 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 ST8SIA4Q92187 359 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 BCL2L14Q9BZR8 327 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 IFT22Q9H7X7 185 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 C5AR2Q9P296 337 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 CACNG2Q9Y698 323 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 TCRBV5S2A0A599 114 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 SERPINA3P01011 423 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 TGFBR1P36897 503 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 GALK2Q01415 458 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 NDUFAF5Q5TEU4 345 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 CNTN4Q8IWV2 1026 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 PGBD5Q8N414 524 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 CPXM2Q8N436 756 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 DNAJC22Q8N4W6 341 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 STOML3Q8TAV4 291 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.42
TCOF1-213ENST00000514442 RHBDF1Q96CC6 855 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 ELMOD3Q96FG2 381 aa12.46□□□□□ -0.42
TCOF1-213ENST00000514442 SCDO00767 359 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 CFL1P23528 166 aaKnown RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 MLLT10P55197 1068 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SLC7A9P82251 487 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 GK2Q14410 553 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SLC25A25Q6KCM7 469 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 TMEM107Q6UX40 140 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SLC16A12Q6ZSM3 486 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 GATSQ8NAP1 163 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 ZNF527Q8NB42 609 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SLC12A9Q9BXP2 914 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 LYARQ9NX58 379 aaKnown RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 CKLFQ9UBR5 152 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 A0A1W2PPL8 197 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 PDCD5O14737 125 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SCO2O43819 266 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 IL1AP01583 271 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 CYP17A1P05093 508 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 ATXN1LP0C7T5 689 aaKnown RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 GNALP38405 381 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 ARFIP1P53367 373 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 GPLD1P80108 840 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 GTDC1Q4AE62 458 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SLC36A4Q6YBV0 504 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 ZBTB44Q8NCP5 570 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 ZNF385DQ9H6B1 395 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 NUDT15Q9NV35 164 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 CNOT2Q9NZN8 540 aaKnown RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 GPR34Q9UPC5 381 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 FKBP7Q9Y680 259 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 CBLP22681 906 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 ATP5A1P25705 553 aaKnown RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 MAN2A2P49641 1150 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 FAM189BP81408 668 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 C19orf57Q0VDD7 668 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 PTGES3Q15185 160 aaKnown RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 ATCAYQ86WG3 371 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 MVB12BQ9H7P6 319 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SCN9AQ15858 1988 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 OR52A4PA6NMU1 304 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 C9J4A7 227 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 NPR2P20594 1047 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 HTR2AP28223 471 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 TRIM23P36406 574 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 CTSCP53634 463 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 DSG2Q14126 1118 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 C4orf46Q504U0 113 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SLC22A15Q8IZD6 547 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SYNPOQ8N3V7 929 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 OR8J1Q8NGP2 316 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 NEK7Q8TDX7 302 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 FOXJ1Q92949 421 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 DNAJA3Q96EY1 480 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 PIP5K1AQ99755 562 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 SLIRPQ9GZT3 109 aaKnown RBP12.45□□□□□ -0.42
TCOF1-213ENST00000514442 LHX3Q9UBR4 397 aa12.45□□□□□ -0.42
TCOF1-213ENST00000514442 hCG_1807616A0A1W2PRN6 198 aa12.44□□□□□ -0.42
TCOF1-213ENST00000514442 SULT1B1O43704 296 aa12.44□□□□□ -0.42
TCOF1-213ENST00000514442 SEMA4FO95754 770 aa12.44□□□□□ -0.42
TCOF1-213ENST00000514442 DNASE1L1P49184 302 aa12.44□□□□□ -0.42
TCOF1-213ENST00000514442 GZMKP49863 264 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms