RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RNF32Q9H0A6 362 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 KAT8Q9H7Z6 458 aaKnown RBP7.73□□□□□ -1.17
CCL28-204ENST00000514421 RMND5AQ9H871 391 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 IL1RL2Q9HB29 575 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 SLAMF7Q9NQ25 335 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 FAM120CQ9NX05 1096 aaKnown RBP7.73□□□□□ -1.17
CCL28-204ENST00000514421 VAPAQ9P0L0 249 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 ABI3Q9P2A4 366 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 ATP6V1HQ9UI12 483 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 MAGEL2Q9UJ55 1249 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 B3GNT3Q9Y2A9 372 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 ZNF780BQ9Y6R6 833 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 CFAP46Q8IYW2 2715 aa7.73□□□□□ -1.17
CCL28-204ENST00000514421 SMG1Q96Q15 3661 aaKnown RBP7.73□□□□□ -1.17
CCL28-204ENST00000514421 TRAV17A0A0B4J275 112 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 TRBV11-1A0A0K0K1C0 115 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 TTLL8A6PVC2 850 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 HNRNPRO43390 633 aaKnown RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 SLC28A2O43868 658 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 TBX19O60806 448 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 ERAL1O75616 437 aaKnown RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 STAMBPO95630 424 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 BAG2O95816 211 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 DDAH2O95865 285 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 ABCB1P08183 1280 aaPredicted RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 IL3P08700 152 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 CPMP14384 443 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 GGT1P19440 569 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 TCN1P20061 433 aaPredicted RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 PEX2P28328 305 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 S100A3P33764 101 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 CD96P40200 585 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 CD97P48960 835 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 ALDH9A1P49189 494 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 TNFSF10P50591 281 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 ZNF267Q14586 743 aaPredicted RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 SLC6A19Q695T7 634 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 FCRLBQ6BAA4 426 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 FAM71E1Q6IPT2 247 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 IZUMO2Q6UXV1 221 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 DGAT2L6Q6ZPD8 337 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 IKBIPQ70UQ0 350 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 SAMD14Q8IZD0 417 aaPredicted RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 ARMC10Q8N2F6 343 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 HIPK4Q8NE63 616 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 TNIP2Q8NFZ5 429 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 GOT1L1Q8NHS2 421 aaPredicted RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 ZNF721Q8TF20 911 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 NUDT8Q8WV74 236 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 MTERF3Q96E29 417 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 RSRC1Q96IZ7 334 aaKnown RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 EGLN2Q96KS0 407 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 NR1H4Q96RI1 486 aaPredicted RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 PKP2Q99959 881 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 KCTD14Q9BQ13 255 aaPredicted RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 UTP23Q9BRU9 249 aaKnown RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCL28-204ENST00000514421 CXorf21Q9HAI6 301 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 C8orf4Q9NR00 106 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 BATF3Q9NR55 127 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 AGPAT4Q9NRZ5 378 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 TAS2R7Q9NYW3 318 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 EHD3Q9NZN3 535 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 GMPR2Q9P2T1 348 aaKnown RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 COPS7AQ9UBW8 275 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 BTNL2Q9UIR0 455 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 ZNF223Q9UK11 482 aaPredicted RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 EXO1Q9UQ84 846 aaKnown RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 YARS2Q9Y2Z4 477 aaKnown RBP7.72□□□□□ -1.17
CCL28-204ENST00000514421 PCDHB14Q9Y5E9 798 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 BOD1L1Q8NFC6 3051 aa7.72□□□□□ -1.17
CCL28-204ENST00000514421 DHRS12A0PJE2 317 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 OR5H15A6NDH6 313 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 TMEM200CA6NKL6 621 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 GABRR3A8MPY1 467 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 FAM220BPB1ANY3 271 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 SCAMP2O15127 329 aaKnown RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 DENRO43583 198 aaKnown RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 MAN1A2O60476 641 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 PRSS23O95084 383 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 IGKV3-11P04433 115 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 FCGR1AP12314 374 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ZNF26P17031 533 aaPredicted RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 GPX2P18283 190 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 DDCP20711 480 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 NT5EP21589 574 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 MPIP34949 423 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 TRHRP34981 398 aaPredicted RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 RPL3P39023 403 aaKnown RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 FEN1P39748 380 aaKnown RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 KIR3DL1P43629 444 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 HSPA13P48723 471 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 CYB561P49447 251 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ERFP50548 548 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 HLCSP50747 726 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 RNF4P78317 190 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ZNF763Q0D2J5 394 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 FUT7Q11130 342 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 MAP4K2Q12851 820 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 TUBA3CQ13748 450 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms