RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ARHGEF9O43307 516 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CLN5O75503 358 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 GLCEO94923 617 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 NADKO95544 446 aaPredicted RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 HLA-DRAP01903 254 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 EPB41P11171 864 aaKnown RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 MBL2P11226 248 aaPredicted RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 ATP6V1B1P15313 513 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 AOC1P19801 751 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 WARSP23381 471 aaKnown RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 OAS2P29728 719 aaKnown RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 IFNAR2P48551 515 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 MAP3K7CLP57077 242 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 GNB1P62873 340 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 RPP38P78345 283 aaKnown RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 ARF5P84085 180 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CYCSP99999 105 aaKnown RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 DHODHQ02127 395 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 GUCY2DQ02846 1103 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 UBXN1Q04323 297 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 LCP2Q13094 533 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 PON2Q15165 354 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 ANGPT1Q15389 498 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 EXT1Q16394 746 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 C2orf76Q3KRA6 126 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CEP85LQ5SZL2 805 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 C1QTNF12Q5T7M4 302 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 ZNF658Q5TYW1 1059 aaPredicted RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 PM20D1Q6GTS8 502 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 TCEAL6Q6IPX3 200 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 SPOPLQ6IQ16 392 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 DHRS11Q6UWP2 260 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 VITQ6UXI7 678 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 BTN2A1Q7KYR7 527 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 SNX32Q86XE0 403 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 MFSD6LQ8IWD5 586 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CMTM8Q8IZV2 173 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 NUP37Q8NFH4 326 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 RPLP0P6Q8NHW5 317 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 GANCQ8TET4 914 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 NR4A3Q92570 626 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 FBXO32Q969P5 355 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 PSMG2Q969U7 264 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 MYLPFQ96A32 169 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 RFT1Q96AA3 541 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 NXPE2Q96DL1 559 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 KCNK16Q96T55 309 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 ASCL2Q99929 193 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 DPEP3Q9H4B8 488 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 EGLN3Q9H6Z9 239 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 SMYD3Q9H7B4 428 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 MTHFD2LQ9H903 347 aaPredicted RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 MED20Q9H944 212 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 KCNK13Q9HB14 408 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 PHPT1Q9NRX4 125 aaPredicted RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 GPR173Q9NS66 373 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 IARS2Q9NSE4 1012 aaKnown RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 FAM49BQ9NUQ9 324 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 DUS2Q9NX74 493 aaKnown RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 GDAP2Q9NXN4 497 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 GTSE1Q9NYZ3 720 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CHMP5Q9NZZ3 219 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 FBXW2Q9UKT8 454 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 RAB23Q9ULC3 237 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 CSNK1G3Q9Y6M4 447 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 MKI67P46013 3256 aaKnown RBP3.66□□□□□ -1.82
HTT-210ENST00000512909 PLXNA4Q9HCM2 1894 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 UBE4BO95155 1302 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 PTPRJQ12913 1337 aa3.66□□□□□ -1.82
HTT-210ENST00000512909 RALGAPA2Q2PPJ7 1873 aa3.65□□□□□ -1.82
HTT-210ENST00000512909 NLRC5Q86WI3 1866 aa3.65□□□□□ -1.82
HTT-210ENST00000512909 TRIM49BA6NDI0 452 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 TMCO5BA8MYB1 307 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.65□□□□□ -1.83
HTT-210ENST00000512909 H3BMM5 538 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 CHADO15335 359 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 ATP6V1G1O75348 118 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 AKAP3O75969 853 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 FGFR1OPO95684 399 aaKnown RBP3.65□□□□□ -1.83
HTT-210ENST00000512909 BAG2O95816 211 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 RPLP0P05388 317 aaKnown RBP3.65□□□□□ -1.83
HTT-210ENST00000512909 UROSP10746 265 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 CCDC130P13994 396 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 ZNF26P17031 533 aaPredicted RBP3.65□□□□□ -1.83
HTT-210ENST00000512909 ATF6P18850 670 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 MT3P25713 68 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 ATP6V1E1P36543 226 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 OR3A2P47893 321 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 CXCL12P48061 93 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 NDST1P52848 882 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 SLC8A3P57103 927 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 STARD6P59095 220 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 FKBP3Q00688 224 aaKnown RBP3.65□□□□□ -1.83
HTT-210ENST00000512909 RUNX3Q13761 415 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 TMEM187Q14656 261 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 TAB1Q15750 504 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 LPAL2Q16609 132 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 DUSP5Q16690 384 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 LRRC37A5PQ49AS3 106 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 CES4AQ5XG92 561 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms