RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 PPP2R2AP63151 447 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 C2orf54Q08AI8 447 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 FUT7Q11130 342 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 DUSP8Q13202 625 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 TOMM20Q15388 145 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 UAP1Q16222 522 aaPredicted RBP6.57□□□□□ -1.36
USP46-208ENST00000512656 FBXL19-AS1Q494R0 122 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 ACSF3Q4G176 576 aaPredicted RBP6.57□□□□□ -1.36
USP46-208ENST00000512656 FLYWCH1Q4VC44 716 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 CCNYL2Q5T2Q4 361 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 FRG2Q64ET8 278 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 TTC19Q6DKK2 380 aaPredicted RBP6.57□□□□□ -1.36
USP46-208ENST00000512656 SCIMPQ6UWF3 145 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 TAOK1Q7L7X3 1001 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 LIX1LQ8IVB5 337 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 ZZZ3Q8IYH5 903 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 ZNF441Q8N8Z8 693 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 OR7G1Q8NGA0 311 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 WDR20Q8TBZ3 569 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 RNASE6Q93091 150 aaKnown RBP6.57□□□□□ -1.36
USP46-208ENST00000512656 MRRFQ96E11 262 aaKnown RBP6.57□□□□□ -1.36
USP46-208ENST00000512656 DTNBP1Q96EV8 351 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 RMND5BQ96G75 393 aaPredicted RBP6.57□□□□□ -1.36
USP46-208ENST00000512656 RILPQ96NA2 401 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 FRG2BQ96QU4 278 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 ZNF717Q9BY31 904 aaPredicted RBP6.57□□□□□ -1.36
USP46-208ENST00000512656 ANGPTL4Q9BY76 406 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 PRDM14Q9GZV8 571 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 PROK2Q9HC23 129 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 RASSF1Q9NS23 344 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 NMRK1Q9NWW6 199 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 ADAM29Q9UKF5 820 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 PSME2Q9UL46 239 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 CAMK2AQ9UQM7 478 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 RNF11Q9Y3C5 154 aa6.57□□□□□ -1.36
USP46-208ENST00000512656 GOLGA6L10A6NI86 522 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 A6NNC1 897 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 NPIPB6E9PJ23 425 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 ETV2O00321 342 aaPredicted RBP6.56□□□□□ -1.36
USP46-208ENST00000512656 RGS13O14921 159 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 PGRMC2O15173 223 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 ACOX3O15254 700 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 LRATO95237 230 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 GOSR1O95249 250 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 ACSL3O95573 720 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 GBAP04062 536 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 INHBAP08476 426 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 CPMP14384 443 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 NT5EP21589 574 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 OPRM1P35372 400 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 CASP3P42574 277 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 SERPINB9P50453 376 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 NEK2P51955 445 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 MAPK12P53778 367 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 FBXW4P57775 412 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 IRF9Q00978 393 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 TEKQ02763 1124 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 GUCY2DQ02846 1103 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 CRYZQ08257 329 aaKnown RBP6.56□□□□□ -1.36
USP46-208ENST00000512656 SNTA1Q13424 505 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 RCAN2Q14206 197 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 DAZAP2Q15038 168 aaPredicted RBP6.56□□□□□ -1.36
USP46-208ENST00000512656 KRTAP21-3Q3LHN1 58 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 NHSL2Q5HYW2 709 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 FBXW10Q5XX13 1052 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 NSUN5P2Q63ZY6 315 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 VASNQ6EMK4 673 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 SLC30A6Q6NXT4 461 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 ZDHHC24Q6UX98 284 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 NUP54Q7Z3B4 507 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 CAMKMTQ7Z624 323 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 TGIF2LYQ8IUE0 185 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 PTGR2Q8N8N7 351 aaPredicted RBP6.56□□□□□ -1.36
USP46-208ENST00000512656 SPPL2AQ8TCT8 520 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 TRPC4APQ8TEL6 797 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 DOK4Q8TEW6 326 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 TMEM41AQ96HV5 264 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 GPR78Q96P69 363 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 TIMP4Q99727 224 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 GPATCH1Q9BRR8 931 aaKnown RBP6.56□□□□□ -1.36
USP46-208ENST00000512656 NTMT1Q9BV86 223 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 TSPYL1Q9H0U9 437 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 OR10A5Q9H207 317 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 VPS11Q9H270 941 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 CXXC4Q9H2H0 198 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 UBQLN3Q9H347 655 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 ELOVL6Q9H5J4 265 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 NOL11Q9H8H0 719 aaKnown RBP6.56□□□□□ -1.36
USP46-208ENST00000512656 METTL7AQ9H8H3 244 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 CALHM2Q9HA72 323 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 TEX10Q9NXF1 929 aaPredicted RBP6.56□□□□□ -1.36
USP46-208ENST00000512656 ST6GALNAC2Q9UJ37 374 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 C15orf41Q9Y2V0 281 aa6.56□□□□□ -1.36
USP46-208ENST00000512656 NSD1Q96L73 2696 aaPredicted RBP6.56□□□□□ -1.36
USP46-208ENST00000512656 PRRC2AP48634 2157 aaKnown RBP6.55□□□□□ -1.36
USP46-208ENST00000512656 C1orf226A1L170 272 aa6.55□□□□□ -1.36
USP46-208ENST00000512656 TUBAL3A6NHL2 446 aa6.55□□□□□ -1.36
USP46-208ENST00000512656 LRRC14BA6NHZ5 514 aa6.55□□□□□ -1.36
USP46-208ENST00000512656 CD8B2A6NJW9 211 aa6.55□□□□□ -1.36
USP46-208ENST00000512656 WASHC1A8K0Z3 465 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms