RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 NUP54Q7Z3B4 507 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 NUDCD3Q8IVD9 361 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 OR6Y1Q8NGX8 325 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 NEIL3Q8TAT5 605 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 EFHD2Q96C19 240 aaPredicted RBP12.15□□□□□ -0.46
RNF4-215ENST00000511843 NTNG2Q96CW9 530 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 ERP27Q96DN0 273 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 ADOQ96SZ5 270 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 SECISBP2Q96T21 854 aaKnown RBP12.15□□□□□ -0.46
RNF4-215ENST00000511843 C1orf50Q9BV19 199 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 OSBPL11Q9BXB4 747 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 EML4Q9HC35 981 aaKnown RBP12.15□□□□□ -0.46
RNF4-215ENST00000511843 EQTNQ9NQ60 294 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 DDX18Q9NVP1 670 aaKnown RBP12.15□□□□□ -0.46
RNF4-215ENST00000511843 TAS2R7Q9NYW3 318 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 KLRF1Q9NZS2 232 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 B4GALT7Q9UBV7 327 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 MAPRE3Q9UPY8 281 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 RNF6Q9Y252 685 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 C15orf41Q9Y2V0 281 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 SLC6A5Q9Y345 797 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 FAM215AQ9Y5M1 114 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 KLF2Q9Y5W3 355 aaPredicted RBP12.15□□□□□ -0.46
RNF4-215ENST00000511843 ADGRG4Q8IZF6 3080 aa12.15□□□□□ -0.46
RNF4-215ENST00000511843 PKDREJQ9NTG1 2253 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 C15orf38-AP3S2A0A0A6YYH1 394 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 OR14I1A6ND48 311 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 PRAMEF25A6NGN4 478 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 KDM4EB2RXH2 506 aaPredicted RBP12.14□□□□□ -0.47
RNF4-215ENST00000511843 BCKDKO14874 412 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 PDPK1O15530 556 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 HCN1O60741 890 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 SNX4O95219 450 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 NAGAP17050 411 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 ACVR2AP27037 513 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 PTPN6P29350 595 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 CDK9P50750 372 aaKnown RBP12.14□□□□□ -0.47
RNF4-215ENST00000511843 WNT3P56703 355 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 DCAF7P61962 342 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 RPP38P78345 283 aaKnown RBP12.14□□□□□ -0.47
RNF4-215ENST00000511843 PSG6Q00889 435 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 CHI3L2Q15782 390 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 ZNF630Q2M218 657 aaPredicted RBP12.14□□□□□ -0.47
RNF4-215ENST00000511843 EIPR1Q53HC9 387 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 XKR7Q5GH72 579 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 WIPI1Q5MNZ9 446 aaPredicted RBP12.14□□□□□ -0.47
RNF4-215ENST00000511843 RNF165Q6ZSG1 346 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 LARP4Q71RC2 724 aaKnown RBP eCLIP12.14□□□□□ -0.47
RNF4-215ENST00000511843 LIX1Q8N485 282 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 PPP1R14CQ8TAE6 165 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 PPCDCQ96CD2 204 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 ELP4Q96EB1 424 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 TMEM41AQ96HV5 264 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 PPP1R36Q96LQ0 422 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 COL21A1Q96P44 957 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 UBQLN3Q9H347 655 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 REEP4Q9H6H4 257 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 SERHLQ9NQF3 203 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 TAS2R9Q9NYW1 312 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 FLRT3Q9NZU0 649 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 SH3BP4Q9P0V3 963 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 C19orf53Q9UNZ5 99 aaPredicted RBP12.14□□□□□ -0.47
RNF4-215ENST00000511843 OR10H1Q9Y4A9 318 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 TEX15Q9BXT5 2789 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 FBN2P35556 2912 aa12.14□□□□□ -0.47
RNF4-215ENST00000511843 DOCK7Q96N67 2140 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 NKX2-6A6NCS4 301 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 OR6C70A6NIJ9 312 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 FAM90A27PA6NNH2 459 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 B4DXG7 233 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 TSPAN2O60636 221 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 COQ9O75208 318 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 PSMG1O95456 288 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 HSPA4LO95757 839 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 AGAP20933 346 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 TCEA1P23193 301 aaKnown RBP12.13□□□□□ -0.47
RNF4-215ENST00000511843 IL12BP29460 328 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 KIR3DL1P43629 444 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 DCST1Q5T197 706 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 WLSQ5T9L3 541 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 TIGD3Q6B0B8 471 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 OR5M10Q6IEU7 315 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 YRDCQ86U90 279 aaKnown RBP12.13□□□□□ -0.47
RNF4-215ENST00000511843 EID3Q8N140 333 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 OR2L13Q8N349 312 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 FAM83FQ8NEG4 500 aaPredicted RBP12.13□□□□□ -0.47
RNF4-215ENST00000511843 OR7A2PQ8NGA2 310 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 OR10Q1Q8NGQ4 319 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 OR1J4Q8NGS1 313 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 FBXO30Q8TB52 745 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 CA5BP1Q8WTZ4 195 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 RND1Q92730 232 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 SARAFQ96BY9 339 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 SLC35A4Q96G79 324 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 METTL2AQ96IZ6 378 aaKnown RBP12.13□□□□□ -0.47
RNF4-215ENST00000511843 TTYH2Q9BSA4 534 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 UCK2Q9BZX2 261 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 C20orf27Q9GZN8 174 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms