RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 NUP214P35658 2090 aaPredicted RBP14.78□□□□□ -0.04
PDLIM5-216ENST00000511767 NAV2Q8IVL1 2488 aa14.77□□□□□ -0.04
PDLIM5-216ENST00000511767 NPIPA2E9PIF3 369 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 NPIPA3F8WFD2 350 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 AQP7O14520 342 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 HCN1O60741 890 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 ICOSLGO75144 302 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 TPOP07202 933 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 EMX2Q04743 252 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 ART3Q13508 389 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 ATP6AP1LQ52LC2 224 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 SLC30A6Q6NXT4 461 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 XKRXQ6PP77 449 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 C3P1Q6ZMU1 363 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 PACS2Q86VP3 889 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 SLC44A2Q8IWA5 706 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 LIX1Q8N485 282 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 ZNF808Q8N4W9 903 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 COQ8BQ96D53 544 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 SLC35A4Q96G79 324 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 JSRP1Q96MG2 331 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 COL21A1Q96P44 957 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 ADOQ96SZ5 270 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 UBQLN3Q9H347 655 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 ACSS1Q9NUB1 689 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 PNPOQ9NVS9 261 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 NTMQ9P121 344 aa14.77□□□□□ -0.05
PDLIM5-216ENST00000511767 CACNA1DQ01668 2161 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 TRGV5A0A0B4J1U4 118 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 TMEM120BA0PK00 339 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 C2orf72A6NCS6 295 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 OR14I1A6ND48 311 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 SKAP2O75563 359 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 SNUPNO95149 360 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 LAMP1P11279 417 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 PRPS2P11908 318 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 MAPK1P28482 360 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 NTSP30990 170 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 MAP3K8P41279 467 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 PNLIPRP2P54317 469 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 MANFP55145 182 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 MAGOHP61326 146 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 PLCXD2Q0VAA5 305 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 BST1Q10588 318 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 SNTA1Q13424 505 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 CASP8Q14790 479 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 SMU1Q2TAY7 513 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 CYP27C1Q4G0S4 372 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 HHATQ5VTY9 493 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 SP5Q6BEB4 398 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 RPTNQ6XPR3 784 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 R3HCC1LQ7Z5L2 792 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 RIMKLAQ8IXN7 391 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 OR7A2PQ8NGA2 310 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 PHF10Q8WUB8 498 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 HOXB13Q92826 284 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 TUBGCP3Q96CW5 907 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 TMEM41AQ96HV5 264 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 PAIP2Q9BPZ3 127 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 LDAHQ9H6V9 325 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 ZNF703Q9H7S9 590 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 AKTIPQ9H8T0 292 aa14.76□□□□□ -0.05
PDLIM5-216ENST00000511767 PDPK1O15530 556 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 ABCB7O75027 752 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 COQ9O75208 318 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 HPNP05981 417 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 AGAP20933 346 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 MAN2A2P49641 1150 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 PSPHP78330 225 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 PTGR1Q14914 329 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 MLC1Q15049 377 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 NCCRP1Q6ZVX7 275 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 LARP4Q71RC2 724 aaKnown RBP eCLIP14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 CD163Q86VB7 1156 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 MARVELD2Q8N4S9 558 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 ANKRD42Q8N9B4 389 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 WDSUB1Q8N9V3 476 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 FNDC5Q8NAU1 212 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 RNF138Q8WVD3 245 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 TMCO6Q96DC7 493 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 ZBED6CLQ96FA7 236 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 LMF2Q9BU23 707 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 C1orf50Q9BV19 199 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 METTL7AQ9H8H3 244 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 PNPLA3Q9NST1 481 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 TNFRSF10DQ9UBN6 386 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 EIF3LQ9Y262 564 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 NOTCH2Q04721 2471 aa14.75□□□□□ -0.05
PDLIM5-216ENST00000511767 NCOA6Q14686 2063 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 GNB5O14775 395 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 TRAPPC6AO75865 159 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 G6PDP11413 515 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 ENDOUP21128 410 aaKnown RBP14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 CDK9P50750 372 aaKnown RBP14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 SMSP52788 366 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 CLDN8P56748 225 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 EFR3AQ14156 821 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 CDSNQ15517 529 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 CPTPQ5TA50 214 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms