RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 TAS2R7Q9NYW3 318 aa20.97■□□□□ 0.95
SNF8-209ENST00000510558 EXO1Q9UQ84 846 aaKnown RBP20.97■□□□□ 0.95
SNF8-209ENST00000510558 MED12Q93074 2177 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 SLC28A1O00337 649 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 AZIN1O14977 448 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 ABCB7O75027 752 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 SEC22BO75396 215 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 PRPH2P23942 346 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 NTSP30990 170 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 KIAA0040Q15053 153 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 WIPI1Q5MNZ9 446 aaPredicted RBP20.96■□□□□ 0.95
SNF8-209ENST00000510558 VASNQ6EMK4 673 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 IKBIPQ70UQ0 350 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 LIX1LQ8IVB5 337 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 PM20D2Q8IYS1 436 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 FAM83FQ8NEG4 500 aaPredicted RBP20.96■□□□□ 0.95
SNF8-209ENST00000510558 ADOQ96SZ5 270 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 MAPRE3Q9UPY8 281 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 FIS1Q9Y3D6 152 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 DCHS2Q6V1P9 2916 aa20.96■□□□□ 0.95
SNF8-209ENST00000510558 AHRRA9YTQ3 701 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 NPIPB8E9PQR5 432 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 RGS14O43566 566 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 TSPAN2O60636 221 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 COQ9O75208 318 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 KRT20P35900 424 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 MC3RP41968 323 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 PSPHP78330 225 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 IFFO1Q0D2I5 559 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 ZNF155Q12901 538 aaPredicted RBP20.95■□□□□ 0.94
SNF8-209ENST00000510558 ACSF3Q4G176 576 aaPredicted RBP20.95■□□□□ 0.94
SNF8-209ENST00000510558 NHSL2Q5HYW2 709 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 SEM1Q6ZVN7 128 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 SLC44A2Q8IWA5 706 aaPredicted RBP20.95■□□□□ 0.94
SNF8-209ENST00000510558 EGLN2Q96KS0 407 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 FAM111AQ96PZ2 611 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 UGT2B28Q9BY64 529 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 PRDM14Q9GZV8 571 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 GLIPR2Q9H4G4 154 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 LRTM1Q9HBL6 345 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 SERHLQ9NQF3 203 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 C1orf109Q9NX04 203 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 LGALS13Q9UHV8 139 aa20.95■□□□□ 0.94
SNF8-209ENST00000510558 KIAA1549Q9HCM3 1950 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 CSMD1Q96PZ7 3565 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 A0A087WV62 115 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 SLITRK5O94991 958 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 NEFHP12036 1026 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 BMP7P18075 431 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 TACR1P25103 407 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 IL12BP29460 328 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 ALDH3A1P30838 453 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 EFR3AQ14156 821 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 TMEM107Q6UX40 140 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 RNF165Q6ZSG1 346 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 LARP4Q71RC2 724 aaKnown RBP eCLIP20.94■□□□□ 0.942e-6■■□□□ 12.5
SNF8-209ENST00000510558 YRDCQ86U90 279 aaKnown RBP20.94■□□□□ 0.94
SNF8-209ENST00000510558 WDSUB1Q8N9V3 476 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 OR2T11Q8NH01 316 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 AENQ8WTP8 325 aaKnown RBP20.94■□□□□ 0.94
SNF8-209ENST00000510558 TUBB1Q9H4B7 451 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 SLC17A7Q9P2U7 560 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 CAMK2AQ9UQM7 478 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 OR10H1Q9Y4A9 318 aa20.94■□□□□ 0.94
SNF8-209ENST00000510558 KDM4EB2RXH2 506 aaPredicted RBP20.93■□□□□ 0.94
SNF8-209ENST00000510558 PLOD2O00469 737 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 SPAG7O75391 227 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 CBR3O75828 277 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 EPPINO95925 133 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 PSG6Q00889 435 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 TLE4Q04727 773 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 SLC25A35Q3KQZ1 300 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 DCST1Q5T197 706 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 KANK2Q63ZY3 851 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 Q6ZSR9 355 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 DMRTC2Q8IXT2 367 aaPredicted RBP20.93■□□□□ 0.94
SNF8-209ENST00000510558 OR4N2Q8NGD1 307 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 ABTB1Q969K4 478 aaPredicted RBP20.93■□□□□ 0.94
SNF8-209ENST00000510558 AMDHD1Q96NU7 426 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 MECRQ9BV79 373 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 DDX18Q9NVP1 670 aaKnown RBP20.93■□□□□ 0.94
SNF8-209ENST00000510558 C19orf53Q9UNZ5 99 aaPredicted RBP20.93■□□□□ 0.94
SNF8-209ENST00000510558 WIF1Q9Y5W5 379 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 PDZD2O15018 2839 aa20.93■□□□□ 0.94
SNF8-209ENST00000510558 HSPB2A8KAH6 182 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 UPK1AO00322 258 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 CHEK2O96017 543 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 CHRNGP07510 517 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 LINC00032P0C843 101 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 PNLIPRP2P54317 469 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 WNT3P56703 355 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 KRTAP10-9P60411 292 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 HSPB2Q16082 182 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 EMBQ6PCB8 327 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 WDR53Q7Z5U6 358 aaPredicted RBP20.92■□□□□ 0.94
SNF8-209ENST00000510558 LACC1Q8IV20 430 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 CLYBLQ8N0X4 340 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 OR2L13Q8N349 312 aa20.92■□□□□ 0.94
SNF8-209ENST00000510558 GFM2Q969S9 779 aaKnown RBP20.92■□□□□ 0.94
SNF8-209ENST00000510558 EFHD2Q96C19 240 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms