RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SUCOQ9UBS9 1254 aaKnown RBP14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 HAO1Q9UJM8 370 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 LIPGQ9Y5X9 500 aa14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 NUP214P35658 2090 aaPredicted RBP14.78□□□□□ -0.04
PDLIM5-212ENST00000509333 NAV2Q8IVL1 2488 aa14.77□□□□□ -0.04
PDLIM5-212ENST00000509333 NPIPA2E9PIF3 369 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 NPIPA3F8WFD2 350 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 AQP7O14520 342 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 HCN1O60741 890 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 ICOSLGO75144 302 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 TPOP07202 933 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 EMX2Q04743 252 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 ART3Q13508 389 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 ATP6AP1LQ52LC2 224 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 SLC30A6Q6NXT4 461 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 XKRXQ6PP77 449 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 C3P1Q6ZMU1 363 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 PACS2Q86VP3 889 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 SLC44A2Q8IWA5 706 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 LIX1Q8N485 282 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 ZNF808Q8N4W9 903 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 COQ8BQ96D53 544 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 SLC35A4Q96G79 324 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 JSRP1Q96MG2 331 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 COL21A1Q96P44 957 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 ADOQ96SZ5 270 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 UBQLN3Q9H347 655 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 ACSS1Q9NUB1 689 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 PNPOQ9NVS9 261 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 NTMQ9P121 344 aa14.77□□□□□ -0.05
PDLIM5-212ENST00000509333 CACNA1DQ01668 2161 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 TRGV5A0A0B4J1U4 118 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 TMEM120BA0PK00 339 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 C2orf72A6NCS6 295 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 OR14I1A6ND48 311 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 SKAP2O75563 359 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 SNUPNO95149 360 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 LAMP1P11279 417 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 PRPS2P11908 318 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 MAPK1P28482 360 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 NTSP30990 170 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 MAP3K8P41279 467 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 PNLIPRP2P54317 469 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 MANFP55145 182 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 MAGOHP61326 146 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 PLCXD2Q0VAA5 305 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 BST1Q10588 318 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 SNTA1Q13424 505 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 CASP8Q14790 479 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 SMU1Q2TAY7 513 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 CYP27C1Q4G0S4 372 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 HHATQ5VTY9 493 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 SP5Q6BEB4 398 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 RPTNQ6XPR3 784 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 R3HCC1LQ7Z5L2 792 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 RIMKLAQ8IXN7 391 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 OR7A2PQ8NGA2 310 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 PHF10Q8WUB8 498 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 HOXB13Q92826 284 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 TUBGCP3Q96CW5 907 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 TMEM41AQ96HV5 264 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 PAIP2Q9BPZ3 127 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 LDAHQ9H6V9 325 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 ZNF703Q9H7S9 590 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 AKTIPQ9H8T0 292 aa14.76□□□□□ -0.05
PDLIM5-212ENST00000509333 PDPK1O15530 556 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 COQ9O75208 318 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 HPNP05981 417 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 AGAP20933 346 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 MAN2A2P49641 1150 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 PSPHP78330 225 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 PTGR1Q14914 329 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 MLC1Q15049 377 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 NCCRP1Q6ZVX7 275 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 LARP4Q71RC2 724 aaKnown RBP eCLIP14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 CD163Q86VB7 1156 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 MARVELD2Q8N4S9 558 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 ANKRD42Q8N9B4 389 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 WDSUB1Q8N9V3 476 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 FNDC5Q8NAU1 212 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 RNF138Q8WVD3 245 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 TMCO6Q96DC7 493 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 ZBED6CLQ96FA7 236 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 LMF2Q9BU23 707 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 C1orf50Q9BV19 199 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 METTL7AQ9H8H3 244 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 PNPLA3Q9NST1 481 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 TNFRSF10DQ9UBN6 386 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 EIF3LQ9Y262 564 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 NOTCH2Q04721 2471 aa14.75□□□□□ -0.05
PDLIM5-212ENST00000509333 NCOA6Q14686 2063 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 GNB5O14775 395 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 TRAPPC6AO75865 159 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 G6PDP11413 515 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 ENDOUP21128 410 aaKnown RBP14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 CDK9P50750 372 aaKnown RBP14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 SMSP52788 366 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 CLDN8P56748 225 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 EFR3AQ14156 821 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms