RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 MPLP40238 635 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 OMPP47874 163 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 UCNP55089 124 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 HERVK_113P63132 956 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 ERVK-25P63136 954 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 MRPS34P82930 218 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 LACTB2Q53H82 288 aaPredicted RBP6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 FAM46CQ5VWP2 391 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 ANKRD16Q6P6B7 361 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 LCTLQ6UWM7 567 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 PLXDC2Q6UX71 529 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 C3orf62Q6ZUJ4 267 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 CIR1Q86X95 450 aaPredicted RBP6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 HS3ST5Q8IZT8 346 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 BCL6BQ8N143 479 aaPredicted RBP6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 LRRC75AQ8NAA5 344 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 OR2L8Q8NGY9 312 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 MAGEC3Q8TD91 643 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 PSMG2Q969U7 264 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 FBXO17Q96EF6 278 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 OLFM3Q96PB7 478 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 CRAMP1Q96RY5 1269 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 SEPHS2Q99611 448 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 CBWD1Q9BRT8 395 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 NICN1Q9BSH3 213 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 MRI1Q9BV20 369 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 ERVK-6Q9BXR3 956 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 SLITRK2Q9H156 845 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 DNAJC4Q9NNZ3 241 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 XPNPEP1Q9NQW7 623 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 ENTPD7Q9NQZ7 604 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 CLEC4EQ9ULY5 219 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 SIT1Q9Y3P8 196 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 GMPPBQ9Y5P6 360 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 CLIC4Q9Y696 253 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 WNT6Q9Y6F9 365 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 AKAP12Q02952 1782 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 KIF24Q5T7B8 1368 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 UTYO14607 1347 aa6.98□□□□□ -1.29
PDGFRA-206ENST00000508170 C3P01024 1663 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 CDHR4A6H8M9 788 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ZNF729A6NN14 1252 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 POC1B-GALNT4F8VUJ3 575 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 FBP2O00757 339 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 CYB561D2O14569 222 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 AQP9O43315 295 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 RBMXL2O75526 392 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 NOL4O94818 638 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 SYNGR4O95473 234 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 HBQ1P09105 142 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 RNF224P0DH78 156 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 NR2C1P13056 603 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 KDELR2P33947 212 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 LIMS1P48059 325 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 RFX5P48382 616 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 EVX2Q03828 476 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 RBBP4Q09028 425 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 CHRFAM7AQ494W8 412 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 DEF8Q6ZN54 512 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ADGRG3Q86Y34 549 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 TMEM156Q8N614 296 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 BEND7Q8N7W2 519 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ZNF611Q8N823 705 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 NLGN4YQ8NFZ3 816 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ACTRT1Q8TDG2 376 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 FAM222BQ8WU58 562 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 FAM172AQ8WUF8 416 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 HGDQ93099 445 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 IGSF8Q969P0 613 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 PSD2Q9BQI7 771 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 DPH7Q9BTV6 452 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 EBF3Q9H4W6 596 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ZCCHC4Q9H5U6 513 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ASB7Q9H672 318 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 SYBUQ9NX95 663 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 STOML2Q9UJZ1 356 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ADGRL3Q9HAR2 1447 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 FER1L4A9Z1Z3 1794 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 TNRQ92752 1358 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 LOC105371242A0A075B767 164 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 A0A0J9YVX5 310 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 PRR23AA6NEV1 266 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 TMEM225BP0DP42 221 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 TACR1P25103 407 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 CD82P27701 267 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 GTF2E2P29084 291 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ADORA2AP29274 412 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 EIF2S3P41091 472 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 RGS6P49758 472 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 KCNQ1P51787 676 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 LOXL3P58215 753 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 GK3PQ14409 553 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 SMCO1Q147U7 214 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 PTPN20Q4JDL3 420 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 FAM69BQ5VUD6 431 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 GDPD4Q6W3E5 623 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 DPY19L3Q6ZPD9 716 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms