RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SUN3Q8TAQ9 357 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SFXN5Q8TD22 340 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 CXorf40AQ8TE69 158 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 GATAD2BQ8WXI9 593 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 LINC01599Q8WXQ3 324 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SMPDL3AQ92484 453 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TM9SF4Q92544 642 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 MRPS31Q92665 395 aaKnown RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 HGDQ93099 445 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 UCN3Q969E3 161 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 GLYATL1Q969I3 302 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 NEIL2Q969S2 332 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM203Q969S6 136 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PHF21AQ96BD5 680 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF689Q96CS4 500 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 OMA1Q96E52 524 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRMT61AQ96FX7 289 aaKnown RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM169Q96HH4 297 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM19Q96HH6 336 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 LRIG1Q96JA1 1093 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC35G5Q96KT7 338 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZSWIM3Q96MP5 696 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 GPR137Q96N19 417 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC6A18Q96N87 628 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 CASD1Q96PB1 797 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR4K3Q96R72 315 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 AIF1LQ9BQI0 150 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 FUZQ9BT04 418 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 FAIM2Q9BWQ8 316 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PINK1Q9BXM7 581 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SERHL2Q9H4I8 314 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZDHHC6Q9H6R6 413 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC28A3Q9HAS3 691 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 BCL2L10Q9HD36 194 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRDM6Q9NQX0 595 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 INPP5EQ9NRR6 644 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 MCUBQ9NWR8 336 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SPG21Q9NZD8 308 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 AKAP7Q9P0M2 348 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 CXXC1Q9P0U4 656 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 RHCGQ9UBD6 479 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 EIF3KQ9UBQ5 218 aaKnown RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SRRDQ9UH36 339 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ADAM29Q9UKF5 820 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 FBXW2Q9UKT8 454 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ACSL6Q9UKU0 697 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ELF5Q9UKW6 265 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 EXO1Q9UQ84 846 aaKnown RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRELID1Q9Y255 219 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SF3B6Q9Y3B4 125 aaKnown RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 AUP1Q9Y679 476 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 CLCA3PQ9Y6N3 262 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SESN1Q9Y6P5 492 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 FRMPD3Q5JV73 1810 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRAV19A0A0A6YYK7 116 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 A0A0B4J293 547 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 A0A0G2JMP0 313 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 C17orf113A0A1B0GUU1 675 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 LOC105371267A0A1B0GV96 52 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 C7orf66A4D0T2 115 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GSAPA4D1B5 854 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ANKRD61A6NGH8 418 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GLTPD2A6NH11 291 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR2AG2A6NM03 316 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 LEUTXA8MZ59 168 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ANHXE9PGG2 379 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 WWP2O00308 870 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 HMGN4O00479 90 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GABRPO00591 440 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC9A3R1O14745 358 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 KIAA0355O15063 1070 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 HPGDSO60760 199 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRAF2O60831 178 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 LILRB5O75023 590 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SH3BGRLO75368 114 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF821O75541 412 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR7A10O76100 309 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 NFATC1O95644 943 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 SERPINA3P01011 423 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 TGFB1P01137 390 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 RAF1P04049 648 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 PDGFAP04085 211 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 URODP06132 367 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 EPHX1P07099 455 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 FHP07954 510 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ADRA2AP08913 450 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 NPPBP16860 134 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 NPR2P20594 1047 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRKACBP22694 351 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 KELP23276 732 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 MMP11P24347 488 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 HTR1FP30939 366 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 NTSP30990 170 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 UQCRC1P31930 480 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 GKP32189 559 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 CA8P35219 290 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 ATP6V1E1P36543 226 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 FEN1P39748 380 aaKnown RBP4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 MMP12P39900 470 aa4.67□□□□□ -1.66
HMGB3P16-201ENST00000508037 NNMTP40261 264 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms