RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 GAS1P54826 345 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 SLC18A2Q05940 514 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 CES4AQ5XG92 561 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 OR5M10Q6IEU7 315 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 FRMD7Q6ZUT3 714 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 CDH24Q86UP0 819 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 PM20D2Q8IYS1 436 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 SAMD14Q8IZD0 417 aaPredicted RBP13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 EIF1ADQ8N9N8 165 aaKnown RBP13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 RDH11Q8TC12 318 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 RNF138Q8WVD3 245 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 NRGNQ92686 78 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 CCDC126Q96EE4 140 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 EGLN2Q96KS0 407 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 TRIB1Q96RU8 372 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 TAS2R7Q9NYW3 318 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 FBXL2Q9UKC9 423 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 GRID1Q9ULK0 1009 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 F8P00451 2351 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 CCDC151A5D8V7 595 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 CD8B2A6NJW9 211 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 SMIM23A6NLE4 172 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 ZIC3O60481 467 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 JUNP05412 331 aaKnown RBP13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 CPN1P15169 458 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 BMP5P22003 454 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 TACR1P25103 407 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 CCT5P48643 541 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 CCDC153Q494R4 210 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 NOXRED1Q6NXP6 359 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 Q6ZSR9 355 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 LARP4Q71RC2 724 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 PLCZ1Q86YW0 608 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 LACC1Q8IV20 430 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 SLC44A2Q8IWA5 706 aaPredicted RBP13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 TRIM42Q8IWZ5 723 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 C4orf33Q8N1A6 199 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 C9orf106Q8NAJ2 232 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 EPS8L3Q8TE67 593 aaKnown RBP13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 UBLCP1Q8WVY7 318 aaPredicted RBP13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 TMCO6Q96DC7 493 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 BBS4Q96RK4 519 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 SH3GL2Q99962 352 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 OR2B2Q9GZK3 357 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 CALHM2Q9HA72 323 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 ZNF629Q9UEG4 869 aaPredicted RBP13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 PTGDR2Q9Y5Y4 395 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 ZFHX3Q15911 3703 aa13.09□□□□□ -0.31
CDC42SE2-209ENST00000506419 UPK1AO00322 258 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 CTAG2O75638 210 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 ACTL6AO96019 429 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 IL2RAP01589 272 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 KRT4P19013 534 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 UQCRC1P31930 480 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 NCBP2P52298 156 aaKnown RBP eCLIP13.08□□□□□ -0.322e-12■■■□□ 16.2
CDC42SE2-209ENST00000506419 PNLIPRP2P54317 469 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 GFRA1P56159 465 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 PSG6Q00889 435 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 ZNF763Q0D2J5 394 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 MYBPHQ13203 477 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 GAB1Q13480 694 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 CLEC6AQ6EIG7 209 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 C10orf107Q8IVU9 208 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 ZZZ3Q8IYH5 903 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 FAM9CQ8IZT9 166 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 CDC26Q8NHZ8 85 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 ZPLD1Q8TCW7 415 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 EFHD2Q96C19 240 aaPredicted RBP13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 ELP4Q96EB1 424 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 TUBA1CQ9BQE3 449 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 G6PC3Q9BUM1 346 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 GATA5Q9BWX5 397 aaPredicted RBP13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 RTN4RQ9BZR6 473 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 L2HGDHQ9H9P8 463 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 MYNNQ9NPC7 610 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 GIMAP4Q9NUV9 329 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 TAS2R10Q9NYW0 307 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 FLRT3Q9NZU0 649 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 C19orf53Q9UNZ5 99 aaPredicted RBP13.08□□□□□ -0.32
CDC42SE2-209ENST00000506419 ZNF469Q96JG9 3925 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 MAP1AP78559 2803 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 FAM221AA4D161 298 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 MBD3L4A6NDZ8 208 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 MBD3L3A6NE82 208 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 MBD3L5A6NJ08 208 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 PLOD2O00469 737 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 COPEO14579 308 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 DVL2O14641 736 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 FADS1O60427 444 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 ABCB7O75027 752 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 PSMG1O95456 288 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 UROSP10746 265 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 CYP4B1P13584 511 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 CTSSP25774 331 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms