RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TPTEP56180 551 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CLDN15P56746 228 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 FZD5Q13467 585 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 HNF4GQ14541 408 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 SYT14P1Q58G82 188 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 BEND6Q5SZJ8 279 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 PRSS57Q6UWY2 283 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ZNF534Q76KX8 674 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 OR8K1Q8NGG5 319 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 OR52E5Q8NH55 327 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 M1APQ8TC57 530 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 MZB1Q8WU39 189 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 MBD6Q96DN6 1003 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ZNF503Q96F45 646 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 TGM7Q96PF1 710 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 SEMA4GQ9NTN9 838 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ASIC5Q9NY37 505 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 KCNE5Q9UJ90 142 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 PSMD13Q9UNM6 376 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CUX2O14529 1486 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 SLC22A23A1A5C7 686 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 MGAT4DA6NG13 374 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 NPIPB6E9PJ23 425 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 SLCO1B7G3V0H7 640 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 SGK494L7N484 410 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 RCBTB2O95199 551 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 ITGB2P05107 769 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 HLA-GP17693 338 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 TNNI1P19237 187 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CR2P20023 1033 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 YWHABP31946 246 aaKnown RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 EWSR1Q01844 656 aaKnown RBP eCLIP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 PKP1Q13835 747 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 KRT81Q14533 505 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 EXOSC7Q15024 291 aaKnown RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 ITPRIPL2Q3MIP1 535 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 SIGIRRQ6IA17 410 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CEACAM20Q6UY09 585 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 MRPL21Q7Z2W9 205 aaKnown RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 FAM122BQ7Z309 247 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 PALB2Q86YC2 1186 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 THAP8Q8NA92 274 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 OR5T1Q8NG75 326 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 RNF183Q96D59 192 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 SPATA2Q9UM82 520 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CHST2Q9Y4C5 530 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CACNG2Q9Y698 323 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 POLR3AO14802 1390 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 ROCK1Q13464 1354 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 E7EWF7 191 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 NPIPA7E9PJI5 369 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 BTN3A3O00478 584 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CNOT3O75175 753 aaKnown RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 RNF8O76064 485 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 PLEKP08567 350 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 NPIPA8P0DM63 369 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 ENO3P13929 434 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 MAGEA11P43364 429 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 NPY2RP49146 381 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 REEP5Q00765 189 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CFHR3Q02985 330 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 MGAT3Q09327 533 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 NAB1Q13506 487 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 TMEM225Q6GV28 225 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 TP53INP2Q8IXH6 220 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 TEX26Q8N6G2 289 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 ARFGAP1Q8N6T3 406 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 MFSD9Q8NBP5 474 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 OR52N4Q8NGI2 321 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 VSTM2LQ96N03 204 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 TMEM175Q9BSA9 504 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 SAV1Q9H4B6 383 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 STARD10Q9Y365 291 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 ZFYVE9O95405 1425 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 SLC28A2O43868 658 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 RPS6KA5O75582 802 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 P04436 131 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 IFNA6P05013 189 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 GSTT2P0CG29 244 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 GSTT2BP0CG30 244 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 HAPLN1P10915 354 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 HMGB2P26583 209 aaKnown RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 GABRR2P28476 465 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CHRNA5P30532 468 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 MMP15P51511 669 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CTSCP53634 463 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 GEMP55040 296 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CTSWP56202 376 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 IFFO1Q0D2I5 559 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 BNIP2Q12982 314 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 FOXE3Q13461 319 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 CTTNQ14247 550 aaKnown RBP4.77□□□□□ -1.65
NIPBL-204ENST00000504430 GPNMBQ14956 572 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 EFNB3Q15768 340 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 VMACQ2NL98 169 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 ZNF568Q3ZCX4 644 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 ACTL9Q8TC94 416 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 SSMEM1Q8WWF3 244 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 TCP11Q8WWU5 503 aa4.77□□□□□ -1.65
NIPBL-204ENST00000504430 TIMD4Q96H15 378 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms