RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ADAM5Q6NVV9 412 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GLIS1Q8NBF1 620 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 SKA2Q8WVK7 121 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 DNASE2BQ8WZ79 361 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 FOXJ1Q92949 421 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 RSPRY1Q96DX4 576 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 FAM84AQ96KN4 292 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 LDAHQ9H6V9 325 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 MYOZ1Q9NP98 299 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 TMPRSS4Q9NRS4 437 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 SPATA31A5Q5VU36 1347 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SPATA31A7Q8IWB4 1347 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF816-ZNF321PA0A0X1KG74 233 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SLC15A5A6NIM6 579 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 GRID2O43424 1007 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 KCNQ2O43526 872 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 NME6O75414 186 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CTDNEP1O95476 244 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 LALBAP00709 142 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 PDGFBP01127 241 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 OR56A5P0C7T3 313 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 POU3F2P20265 443 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CXCR1P25024 350 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 RPS12P25398 132 aaKnown RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 GNRHRP30968 328 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 RPS15P62841 145 aaKnown RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 IFITM2Q01629 132 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 NKAIN1Q4KMZ8 207 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 C9orf64Q5T6V5 341 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 PID1Q7Z2X4 250 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 BOLLQ8N9W6 283 aaKnown RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 RBM15BQ8NDT2 890 aaKnown RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SLC22A17Q8WUG5 538 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 HGDQ93099 445 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ARL11Q969Q4 196 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 MCHR2Q969V1 340 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SCMH1Q96GD3 660 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 FER1L6-AS2Q96M78 137 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 LINC00052Q96N35 136 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ERGIC2Q96RQ1 377 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 BCO2Q9BYV7 579 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CNTNAP3Q9BZ76 1288 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 RNF121Q9H920 327 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CSNK1G3Q9Y6M4 447 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 XRN1Q8IZH2 1706 aaKnown RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 LRRC7Q96NW7 1537 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 IQSEC2Q5JU85 1478 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SPATA31A1Q5TZJ5 1347 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 MEX3AA1L020 520 aaKnown RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 A6NIZ1 184 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 AP4M1O00189 453 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ITGAVP06756 1048 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SLC2A2P11168 524 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 FABP4P15090 132 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 PTPREP23469 700 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 IL13P35225 146 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ACTBL2Q562R1 376 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 STYXQ8WUJ0 223 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 APH1AQ96BI3 265 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CXorf40BQ96DE9 158 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 MASTLQ96GX5 879 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 MICU1Q9BPX6 476 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 DUSP26Q9BV47 211 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CLEC2DQ9UHP7 191 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ADAM29Q9UKF5 820 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ERVH48-1M5A8F1 160 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 FFAR3O14843 346 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 GPR42O15529 346 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SUSD5O60279 629 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 TFAP2AP05549 437 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 TRAPPC2P0DI81 140 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 TRAPPC2BP0DI82 140 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SDC2P34741 201 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ACVR1BP36896 505 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 KIR3DL2P43630 455 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 BAATQ14032 418 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF691Q5VV52 312 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 KCTD1Q719H9 257 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 FBXO39Q8N4B4 442 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 TCEANCQ8N8B7 351 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 NHLRC2Q8NBF2 726 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 TMEM161BQ8NDZ6 487 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 OR13C9Q8NGT0 318 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 PHOSPHO1Q8TCT1 267 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF516Q92618 1163 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SMARCD2Q92925 531 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 MARVELD3Q96A59 401 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 DCLRE1CQ96SD1 692 aaKnown RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ACOXLQ9NUZ1 547 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 MED14O60244 1454 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CCDC187A0A096LP49 1063 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 FTH1P02794 183 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 THP07101 528 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 EFNA1P20827 205 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CDK2P24941 298 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 GJA5P36382 358 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 GUCA1AP43080 201 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 PTGFRP43088 359 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 PSEN2P49810 448 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms