RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 LACC1Q8IV20 430 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 HDAC2Q92769 488 aaKnown RBP20.53■□□□□ 0.88
PTPN13-205ENST00000502971 HOXB13Q92826 284 aaPredicted RBP20.53■□□□□ 0.88
PTPN13-205ENST00000502971 RIT1Q92963 219 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 SDF2Q99470 211 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 GAREM1Q9H706 876 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 ZNF556Q9HAH1 456 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 RHCGQ9UBD6 479 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 SLC13A4Q9UKG4 626 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 TMCC3Q9ULS5 477 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 WDR45Q9Y484 360 aa20.53■□□□□ 0.88
PTPN13-205ENST00000502971 TMEM184BQ9Y519 407 aaPredicted RBP20.53■□□□□ 0.88
PTPN13-205ENST00000502971 TRIM64CA6NLI5 447 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 E9PQ18 207 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 M0R3H8 397 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 CBX7O95931 251 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 STT3AP46977 705 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 GCGRP47871 477 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 EXOSC7Q15024 291 aaKnown RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 YOD1Q5VVQ6 348 aaPredicted RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 TYW3Q6IPR3 259 aaKnown RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 ZC3H14Q6PJT7 736 aaKnown RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 COMTD1Q86VU5 262 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 RBM45Q8IUH3 476 aaKnown RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 GPR135Q8IZ08 494 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 METTL27Q8N6F8 245 aaPredicted RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 OR52P1PQ8NH57 321 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 OR1L3Q8NH93 324 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 DOK4Q8TEW6 326 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 FBLIM1Q8WUP2 373 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 NR4A3Q92570 626 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 ZNF578Q96N58 590 aaPredicted RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 DGAT2Q96PD7 388 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 ARHGDIGQ99819 225 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 APOL4Q9BPW4 351 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 PELOQ9BRX2 385 aaKnown RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 QRSL1Q9H0R6 528 aaKnown RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 FSCN3Q9NQT6 498 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 SERTAD3Q9UJW9 196 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 NDRG4Q9ULP0 352 aaKnown RBP20.52■□□□□ 0.88
PTPN13-205ENST00000502971 CDC14AQ9UNH5 594 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 GMPPBQ9Y5P6 360 aa20.52■□□□□ 0.88
PTPN13-205ENST00000502971 SMIM31A0A1B0GVY4 71 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 EME2A4GXA9 379 aaPredicted RBP20.51■□□□□ 0.87
PTPN13-205ENST00000502971 A8MU76 341 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 TGFBR3LH3BV60 316 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 DLL1O00548 723 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 SIGLEC6O43699 453 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 FCMRO60667 390 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 SEMA7AO75326 666 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 ZIC2O95409 532 aaPredicted RBP20.51■□□□□ 0.87
PTPN13-205ENST00000502971 OXSR1O95747 527 aaPredicted RBP20.51■□□□□ 0.87
PTPN13-205ENST00000502971 FOLR1P15328 257 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 GALNSP34059 522 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 TOP3AQ13472 1001 aaPredicted RBP20.51■□□□□ 0.87
PTPN13-205ENST00000502971 ERV3-1Q14264 604 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 DGAT2L6Q6ZPD8 337 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 TTLL10Q6ZVT0 673 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 PEX5LQ8IYB4 626 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 OR52R1Q8NGF1 315 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 PMM1Q92871 262 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 LOXL4Q96JB6 756 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 PITX2Q99697 317 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 WFDC6Q9BQY6 131 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 NUDT22Q9BRQ3 303 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF350Q9GZX5 532 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 KLHL28Q9NXS3 571 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 ENOPH1Q9UHY7 261 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 A4GNTQ9UNA3 340 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 CLDN16Q9Y5I7 305 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 CCDC88CQ9P219 2028 aa20.51■□□□□ 0.87
PTPN13-205ENST00000502971 LY6G6EA0A0G2JKS1 128 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 CDC123O75794 336 aaPredicted RBP20.5■□□□□ 0.87
PTPN13-205ENST00000502971 CYP4B1P13584 511 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 S1PR1P21453 382 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 ELK4P28324 431 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 HLCSP50747 726 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 BTG2P78543 158 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 CD47Q08722 323 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 RAPSNQ13702 412 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 SERTAD2Q14140 314 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 C6orf141Q5SZD1 244 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 DCST1Q5T197 706 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 DCST2Q5T1A1 773 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 GUSBP11Q6P575 273 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 TSPYL5Q86VY4 417 aaPredicted RBP20.5■□□□□ 0.87
PTPN13-205ENST00000502971 VRK2Q86Y07 508 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 COX18Q8N8Q8 333 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 OR6T1Q8NGN1 323 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 FKBP10Q96AY3 582 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 ZG16BQ96DA0 208 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 PRRC1Q96M27 445 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 NDC1Q9BTX1 674 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 SAP130Q9H0E3 1048 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 FANCEQ9HB96 536 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 CAPN10Q9HC96 672 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 RLIMQ9NVW2 624 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 GMEB2Q9UKD1 530 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF232Q9UNY5 417 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 U3KQA8 63 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms