RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SACM1LQ9NTJ5 587 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 CNOT11Q9UKZ1 510 aaKnown RBP23.1■■□□□ 1.29
LSM6-202ENST00000502781 PCDHGB4Q9UN71 923 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 KLRC4-KLRK1H3BQV0 150 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 PEX1O43933 1283 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 TSPAN2O60636 221 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 GAB1Q13480 694 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 ZNHIT3Q15649 155 aaPredicted RBP23.09■■□□□ 1.29
LSM6-202ENST00000502781 VPS26BQ4G0F5 336 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 CYP27C1Q4G0S4 372 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 MSANTD1Q6ZTZ1 278 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 NUP54Q7Z3B4 507 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 SZRD1Q7Z422 152 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 WDR53Q7Z5U6 358 aaPredicted RBP23.09■■□□□ 1.29
LSM6-202ENST00000502781 FUNDC1Q8IVP5 155 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 FBXW8Q8N3Y1 598 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 ZFP62Q8NB50 900 aaPredicted RBP23.09■■□□□ 1.29
LSM6-202ENST00000502781 FAM13CQ8NE31 585 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 OR4A15Q8NGL6 344 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 DNAJB8Q8NHS0 232 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 SPPL2AQ8TCT8 520 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 FAR1Q8WVX9 515 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 HGDQ93099 445 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 MIB2Q96AX9 1013 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 C16orf58Q96GQ5 468 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 RILPQ96NA2 401 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 PROK2Q9HC23 129 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 Q9N2J8 555 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 SERHLQ9NQF3 203 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 CNIH4Q9P003 139 aa23.09■■□□□ 1.29
LSM6-202ENST00000502781 SHANK1Q9Y566 2161 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 ANKRD33BA6NCL7 494 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 OR6C70A6NIJ9 312 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 TP53I11O14683 189 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 ACP2P11117 423 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 CNR1P21554 472 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 PMP22Q01453 160 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 RCAN2Q14206 197 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 SQLEQ14534 574 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 SPDYE7PQ495Y7 208 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 TMEM81Q6P7N7 255 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 FAM180AQ6UWF9 173 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.08■■□□□ 1.29
LSM6-202ENST00000502781 BCORP1Q8N888 145 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 FAM98AQ8NCA5 519 aaKnown RBP23.08■■□□□ 1.29
LSM6-202ENST00000502781 SLC16A11Q8NCK7 471 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 CHMP6Q96FZ7 201 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 SLC52A3Q9NQ40 469 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 GIN1Q9NXP7 522 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 KLHL14Q9P2G3 628 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 CBLCQ9ULV8 474 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 TRIM33Q9UPN9 1127 aa23.08■■□□□ 1.29
LSM6-202ENST00000502781 ABCB7O75027 752 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 UGT2B11O75310 529 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 CPSF4O95639 269 aaKnown RBP23.07■■□□□ 1.28
LSM6-202ENST00000502781 P04436 131 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 MAN2A2P49641 1150 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 PRIM2P49643 509 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 MEOX1P50221 254 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 ARFIP2P53365 341 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 TP53BP2Q13625 1128 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 LASP1Q14847 261 aaKnown RBP23.07■■□□□ 1.28
LSM6-202ENST00000502781 BHLHB9Q6PI77 547 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 BLOC1S3Q6QNY0 202 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 CPSF7Q8N684 471 aaKnown RBP23.07■■□□□ 1.28
LSM6-202ENST00000502781 POGLUT1Q8NBL1 392 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 OR2M7Q8NG81 312 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 OR5M3Q8NGP4 307 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 OR5AK3PQ8NH89 298 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 SLX1AQ9BQ83 275 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 AGPAT4Q9NRZ5 378 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 FAM53CQ9NYF3 392 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 OR10H1Q9Y4A9 318 aa23.07■■□□□ 1.28
LSM6-202ENST00000502781 RP1L1Q8IWN7 2480 aaPredicted RBP23.07■■□□□ 1.28
LSM6-202ENST00000502781 A0A0G2JMM0 328 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 A0A1W2PPB8 328 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 A0A1W2PRS3 328 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 KIR3DP1A8MWS1 328 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 REM1O75628 298 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 CRYABP02511 175 aaKnown RBP23.06■■□□□ 1.28
LSM6-202ENST00000502781 UQCRC2P22695 453 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 GABRA3P34903 492 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 PIGAP37287 484 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 PNLIPRP2P54317 469 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 GYS2P54840 703 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 GPR85P60893 370 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 DUSP5Q16690 384 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 DESI1Q6ICB0 168 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 RNF138Q8WVD3 245 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 NR4A3Q92570 626 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 SLC9A6Q92581 669 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 DIO2Q92813 273 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 STACQ99469 402 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 FAM173AQ9BQD7 235 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 INPP5KQ9BT40 448 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 ACTRT3Q9BYD9 372 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 DUSP22Q9NRW4 184 aa23.06■■□□□ 1.28
LSM6-202ENST00000502781 RNF103-CHMP3A0A140T963 221 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 PINLYPA6NC86 204 aa23.05■■□□□ 1.28
LSM6-202ENST00000502781 NCF2P19878 526 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms