RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ERVK-19Q9WJR5 959 aa5.04□□□□□ -1.6
SPTA1-209ENST00000498708 PPP2R2CQ9Y2T4 447 aa5.04□□□□□ -1.6
SPTA1-209ENST00000498708 MTO1Q9Y2Z2 717 aaKnown RBP5.04□□□□□ -1.6
SPTA1-209ENST00000498708 SLC6A5Q9Y345 797 aa5.04□□□□□ -1.6
SPTA1-209ENST00000498708 WNK1Q9H4A3 2382 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 GOLGA6L10A0A0M3HER8 536 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 LRRC3CA6NJW4 275 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 GLOD5A6NK44 160 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 HSPB2A8KAH6 182 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 FAM25EA8MYX2 175 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 EEF1E1-BLOC1S5C9J1V9 151 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 DVL2O14641 736 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 EEF1E1O43324 174 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SUSD5O60279 629 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 STK16O75716 305 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 GOSR1O95249 250 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 S100BP04271 92 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 CCDC166P0CW27 439 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 COX7A2P14406 83 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 GABRA1P14867 456 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PAX1P15863 534 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 FPR1P21462 350 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 ATP5A1P25705 553 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SSR2P43308 183 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 STT3AP46977 705 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 FNTAP49354 379 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 HNMTP50135 292 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 MRPS25P82663 173 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 CDKL1Q00532 357 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 IRF8Q02556 426 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 TGM3Q08188 693 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 MGAT5Q09328 741 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PDIA2Q13087 525 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 DUSP8Q13202 625 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SLAMF1Q13291 335 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SERTAD2Q14140 314 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 RCN2Q14257 317 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 FASTKD3Q14CZ7 662 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 EFTUD2Q15029 972 aaKnown RBP eCLIP5.03□□□□□ -1.61e-8■□□□□ 8.7
SPTA1-209ENST00000498708 TGFBIQ15582 683 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 OR4D1Q15615 310 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 HSPB2Q16082 182 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 CLEC12BQ2HXU8 276 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 HYAL4Q2M3T9 481 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 VMACQ2NL98 169 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 AP5B1Q2VPB7 878 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PIGGQ5H8A4 983 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 C6orf52Q5T4I8 152 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 BICRALQ6AI39 1079 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 ADAMTSL2Q86TH1 951 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 ZC3HC1Q86WB0 502 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 MEX3DQ86XN8 651 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 KIF18BQ86Y91 864 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 GPSM1Q86YR5 675 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 MYLK4Q86YV6 388 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PRR22Q8IZ63 422 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PDIK1LQ8N165 341 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 ACOT4Q8N9L9 421 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 FBXO36Q8NEA4 188 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 TTLQ8NG68 377 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 OR10G3Q8NGC4 313 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SGMS2Q8NHU3 365 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 NEIL3Q8TAT5 605 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 RDH11Q8TC12 318 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 ZNF473Q8WTR7 871 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 IGFBPL1Q8WX77 278 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 DIO2Q92813 273 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PTCD3Q96EY7 689 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 LRRC46Q96FV0 321 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 C1orf159Q96HA4 380 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PDLIM5Q96HC4 596 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SENP5Q96HI0 755 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 MPP4Q96JB8 637 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SGCZQ96LD1 299 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 DACH2Q96NX9 599 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 OSBPL9Q96SU4 736 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 NAP1L3Q99457 506 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PIGQQ9BRB3 760 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 NAT9Q9BTE0 207 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 DOHHQ9BU89 302 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 ZNF703Q9H7S9 590 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 NT5DC2Q9H857 520 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 L2HGDHQ9H9P8 463 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 PROK2Q9HC23 129 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SMYD2Q9NRG4 433 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 MTRF1LQ9UGC7 380 aaKnown RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 BLOC1S6Q9UL45 172 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 CORO1CQ9ULV4 474 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 BOKQ9UMX3 212 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-209ENST00000498708 SPACA6W5XKT8 324 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 NCKAP5O14513 1909 aa5.03□□□□□ -1.6
SPTA1-209ENST00000498708 UQCRHLA0A096LP55 91 aa5.02□□□□□ -1.61
SPTA1-209ENST00000498708 IQANK1A0A1B0GTG1 560 aa5.02□□□□□ -1.61
SPTA1-209ENST00000498708 A0A1W2PS29 197 aa5.02□□□□□ -1.61
SPTA1-209ENST00000498708 SH3D21A4FU49 640 aa5.02□□□□□ -1.61
SPTA1-209ENST00000498708 DEFB108AA8MXU0 73 aa5.02□□□□□ -1.61
SPTA1-209ENST00000498708 SUPT3HB4E1H0 165 aa5.02□□□□□ -1.61
SPTA1-209ENST00000498708 FAM47E-STBD1D6RA91 191 aa5.02□□□□□ -1.61
SPTA1-209ENST00000498708 OR10H2O60403 315 aa5.02□□□□□ -1.61
SPTA1-209ENST00000498708 HCN1O60741 890 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms