RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GTF3C4Q9UKN8 822 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 EXOSC1Q9Y3B2 195 aaKnown RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 COMMD10Q9Y6G5 202 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 COX11Q9Y6N1 276 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 DDX60Q8IY21 1712 aaKnown RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 A0A075B6Q4 140 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 IGKV2D-24A0A075B6R9 120 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 IGKV2-24A0A0C4DH68 120 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SYNDIG1LA6NDD5 238 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TEX22C9J3V5 150 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 E7EVH7 732 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 H3BTX0 84 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 AIM2O14862 343 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 POLR3GO15318 223 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 MPPED1O15442 326 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RGS14O43566 566 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KCNJ13O60928 360 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CNOT3O75175 753 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 DNAJB5O75953 348 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PENKP01210 267 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 C4BPAP04003 597 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 KLK1P06870 262 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CYP11B2P19099 503 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 HOXA5P20719 270 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 UQCRC2P22695 453 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MCM3P25205 808 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PSMA4P25789 261 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 CHRNA3P32297 505 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 THBS4P35443 961 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SOAT1P35610 550 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OPRL1P41146 370 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DPP6P42658 865 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 GMPSP49915 693 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZP1P60852 638 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CYP4F2P78329 520 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ARF5P84085 180 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF33BQ06732 778 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RBBP4Q09028 425 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PTPRRQ15256 657 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RHEBQ15382 184 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TAL2Q16559 108 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DUSP6Q16828 381 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 QRICH1Q2TAL8 776 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SETMARQ53H47 684 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 UBE2NLQ5JXB2 153 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LCE3BQ5TA77 95 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DARS2Q6PI48 645 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 RNF44Q7L0R7 432 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 H2BFWTQ7Z2G1 175 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PLCZ1Q86YW0 608 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF664Q8N3J9 261 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 METTL25Q8N6Q8 603 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ANKRD13CQ8N6S4 541 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ARIH2OSQ8N7S6 290 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DCAF4L2Q8NA75 395 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SYT14Q8NB59 555 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OR52E1Q8NGJ3 308 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 GOT1L1Q8NHS2 421 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 RAB3IL1Q8TBN0 382 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MZB1Q8WU39 189 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LPPQ93052 612 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF566Q969W8 418 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RHBDF1Q96CC6 855 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ELP4Q96EB1 424 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 HIC2Q96JB3 615 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PBKQ96KB5 322 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 WACQ9BTA9 647 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 C6orf106Q9H6K1 298 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 DHX33Q9H6R0 707 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 SLC38A10Q9HBR0 1119 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ISYNA1Q9NPH2 558 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SLC52A3Q9NQ40 469 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DDX18Q9NVP1 670 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 UXTQ9UBK9 157 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF282Q9UDV7 671 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 IKZF2Q9UKS7 526 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ERVK-19Q9WJR5 959 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 POLHQ9Y253 713 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 WBP11Q9Y2W2 641 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ENTPD2Q9Y5L3 495 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 POMT1Q9Y6A1 747 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 BSNQ9UPA5 3926 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SPTBN5Q9NRC6 3674 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 NBEAL2Q6ZNJ1 2754 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TRAV9-2A0A087WT02 112 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 EME2A4GXA9 379 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 G3V2T6 193 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 G3V4G9 280 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SOCS2O14508 198 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CETN3O15182 167 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DNAJC8O75937 253 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 C22orf31O95567 290 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 EML2O95834 649 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 HRGP04196 525 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KRT18P05783 430 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 GP1BAP07359 652 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MYF5P13349 255 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CFPP27918 469 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 GKP32189 559 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms