RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 OR51I1Q9H343 314 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 TPT1P8Q9HAU6 139 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 Q9N2J8 555 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 ARL8BQ9NVJ2 186 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 VAPAQ9P0L0 249 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 MAP10Q9P2G4 905 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 LHX6Q9UPM6 363 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 ZNF451Q9Y4E5 1061 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 LAMA5O15230 3695 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 A8MVJ9 347 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 CLIC1O00299 241 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 NKX2-2O95096 273 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 KRT75O95678 551 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 KRT16P08779 473 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 OR12D1P0DN82 309 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 HOXB9P17482 250 aaPredicted RBP10.98□□□□□ -0.65
CUX1-210ENST00000497815 ABCD3P28288 659 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 CASRP41180 1078 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 CRATP43155 626 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 CYB561P49447 251 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 KHKP50053 298 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 HLCSP50747 726 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 TUBA3CQ13748 450 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 LY6DQ14210 128 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 LACTB2Q53H82 288 aaPredicted RBP10.98□□□□□ -0.65
CUX1-210ENST00000497815 COX20Q5RI15 118 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 ZCCHC12Q6PEW1 402 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 TUBA3EQ6PEY2 450 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 FIGNL1Q6PIW4 674 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 OPN5Q6U736 354 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 DLEU7Q6UYE1 221 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 DPP10Q8N608 796 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 HORMAD2Q8N7B1 307 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 PCYOX1LQ8NBM8 494 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 FAM13CQ8NE31 585 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 CATSPER1Q8NEC5 780 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 C17orf47Q8NEP4 570 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 TM9SF4Q92544 642 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 RAB8BQ92930 207 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 EFHD2Q96C19 240 aaPredicted RBP10.98□□□□□ -0.65
CUX1-210ENST00000497815 OMA1Q96E52 524 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 HSPBAP1Q96EW2 488 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 RMND5BQ96G75 393 aaPredicted RBP10.98□□□□□ -0.65
CUX1-210ENST00000497815 OR7D2Q96RA2 312 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 SLC39A3Q9BRY0 314 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 MFRPQ9BY79 579 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.98□□□□□ -0.659e-7■■□□□ 14.3
CUX1-210ENST00000497815 ADNPQ9H2P0 1102 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 HPF1Q9NWY4 346 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 CSAG2Q9Y5P2 127 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 NPFFR2Q9Y5X5 522 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 KCNE3Q9Y6H6 103 aa10.98□□□□□ -0.65
CUX1-210ENST00000497815 MAP1BP46821 2468 aaKnown RBP10.98□□□□□ -0.65
CUX1-210ENST00000497815 TRBV5-3A0A0A0MS03 114 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 OR5H15A6NDH6 313 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 ERVH48-1M5A8F1 160 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 ACOX3O15254 700 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 REM1O75628 298 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 UNC5CO95185 931 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 FBXO45P0C2W1 286 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 ETFAP13804 333 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 IL12BP29460 328 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 PRDX6P30041 224 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 TRHRP34981 398 aaPredicted RBP10.97□□□□□ -0.65
CUX1-210ENST00000497815 KRT20P35900 424 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 MAP3K8P41279 467 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 MAN2A2P49641 1150 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 NUDT2P50583 147 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 FBXW4P57775 412 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 MTPNP58546 118 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 MRPS22P82650 360 aaKnown RBP10.97□□□□□ -0.65
CUX1-210ENST00000497815 OR1C1Q15619 314 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 TRMT5Q32P41 509 aaKnown RBP10.97□□□□□ -0.65
CUX1-210ENST00000497815 COQ5Q5HYK3 327 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 CCNJQ5T5M9 372 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 LCE2DQ5TA82 110 aaPredicted RBP10.97□□□□□ -0.65
CUX1-210ENST00000497815 DESI1Q6ICB0 168 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 SPINK14Q6IE38 97 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 PCSK4Q6UW60 755 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 IGFL2Q6UWQ7 119 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 LYPD8Q6UX82 237 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 SLC34A3Q8N130 599 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 CYP4Z2PQ8N1L4 340 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 ZADH2Q8N4Q0 377 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 SLC15A4Q8N697 577 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 BCORP1Q8N888 145 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 DNAJB8Q8NHS0 232 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 XAGE5Q8WWM1 108 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 HOXB13Q92826 284 aaPredicted RBP10.97□□□□□ -0.65
CUX1-210ENST00000497815 LRRC58Q96CX6 371 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 SPACA9Q96E40 222 aaPredicted RBP10.97□□□□□ -0.65
CUX1-210ENST00000497815 SLC35A4Q96G79 324 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 SIGLEC12Q96PQ1 595 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 ADOQ96SZ5 270 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 CGREF1Q99674 301 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 THUMPD3Q9BV44 507 aaKnown RBP10.97□□□□□ -0.65
CUX1-210ENST00000497815 PIGUQ9H490 435 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 GID8Q9NWU2 228 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 LRFN1Q9P244 771 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 TAGLN3Q9UI15 199 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms