RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 UBLCP1Q8WVY7 318 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-212ENST00000496458 SAMD8Q96LT4 415 aa4.19□□□□□ -1.74
SF3B1-212ENST00000496458 RASL10BQ96S79 203 aa4.19□□□□□ -1.74
SF3B1-212ENST00000496458 THUMPD2Q9BTF0 503 aaKnown RBP4.19□□□□□ -1.74
SF3B1-212ENST00000496458 CUEDC2Q9H467 287 aa4.19□□□□□ -1.74
SF3B1-212ENST00000496458 RIBC2Q9H4K1 309 aa4.19□□□□□ -1.74
SF3B1-212ENST00000496458 NMRK1Q9NWW6 199 aa4.19□□□□□ -1.74
SF3B1-212ENST00000496458 TRIM10Q9UDY6 481 aa4.19□□□□□ -1.74
SF3B1-212ENST00000496458 NPATQ14207 1427 aa4.19□□□□□ -1.74
SF3B1-212ENST00000496458 KIF16BQ96L93 1317 aa4.19□□□□□ -1.74
SF3B1-212ENST00000496458 ZNF646O15015 1829 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-212ENST00000496458 PZPP20742 1482 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 DEPDC5O75140 1603 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 CAMSAP1Q5T5Y3 1602 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 PRDM15P57071 1507 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-212ENST00000496458 TRAV9-2A0A087WT02 112 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 TRBV2A0A0J9YWF9 115 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 A0A1B0GWJ7 208 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 MAGEB3O15480 346 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 AKR7A3O95154 331 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 SLC16A8O95907 504 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 MT-ATP6P00846 226 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 TGFAP01135 160 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 FHP07954 510 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 NCF1P14598 390 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-212ENST00000496458 GDI1P31150 447 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 CHRNA3P32297 505 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 SOX6P35712 828 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 IST1P53990 364 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 UCP2P55851 309 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 NDPQ00604 133 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 CUL2Q13617 745 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 IDI1Q13907 227 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 AFTPHQ6ULP2 937 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 ANGPTL8Q6UXH0 198 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 CCDC71Q8IV32 467 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-212ENST00000496458 IQCF2Q8IXL9 164 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 FAM133AQ8N9E0 248 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 OR52E1Q8NGJ3 308 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 ITFG2Q969R8 447 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 COG3Q96JB2 828 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 OSBPL8Q9BZF1 889 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 NGBQ9NPG2 151 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 DDX18Q9NVP1 670 aaKnown RBP4.18□□□□□ -1.74
SF3B1-212ENST00000496458 SPG21Q9NZD8 308 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 ANKMY1Q9P2S6 941 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 TRMT6Q9UJA5 497 aaKnown RBP4.18□□□□□ -1.74
SF3B1-212ENST00000496458 SLC6A5Q9Y345 797 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 KIF25-AS1Q9Y6Z4 181 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 KIAA1217Q5T5P2 1943 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 ZC3H13Q5T200 1668 aaKnown RBP4.18□□□□□ -1.74
SF3B1-212ENST00000496458 HFM1A2PYH4 1435 aa4.18□□□□□ -1.74
SF3B1-212ENST00000496458 FAM135AQ9P2D6 1515 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 FAM168BA1KXE4 195 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 CTAGE15A4D2H0 777 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 LRRTM2O43300 516 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 PIGRP01833 764 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 C8orf89P0DMQ9 161 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 UMPSP11172 480 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 DNAJB1P25685 340 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SFNP31947 248 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 FRKP42685 505 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-212ENST00000496458 DHPSP49366 369 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-212ENST00000496458 NAAAQ02083 359 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SCGB2A2Q13296 93 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 GPM6BQ13491 265 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SNX1Q13596 522 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 MXD4Q14582 209 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SPATA46Q5T0L3 261 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 MARC1Q5VT66 337 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 ARMCX2Q7L311 632 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SYVN1Q86TM6 617 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 CTAGE6Q86UF2 777 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SIAH3Q8IW03 269 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 AQP12AQ8IXF9 295 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 ZNF444Q8N0Y2 327 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SAMD12Q8N8I0 201 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 EXOC6Q8TAG9 804 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 ANKRD49Q8WVL7 239 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 THRSPQ92748 146 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SNRNP40Q96DI7 357 aaKnown RBP4.17□□□□□ -1.74
SF3B1-212ENST00000496458 C14orf79Q96F83 325 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SPATA13Q96N96 652 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 RANBP9Q96S59 729 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 PAIP2Q9BPZ3 127 aaKnown RBP4.17□□□□□ -1.74
SF3B1-212ENST00000496458 CCSER1Q9C0I3 900 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 RPAP3Q9H6T3 665 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-212ENST00000496458 NT5DC2Q9H857 520 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 AKIRIN1Q9H9L7 192 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-212ENST00000496458 MED4Q9NPJ6 270 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 TRPV5Q9NQA5 729 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 CENPMQ9NSP4 180 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 PNPLA3Q9NST1 481 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 ARHGAP31Q2M1Z3 1444 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 SETD5Q9C0A6 1442 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 VWDEQ8N2E2 1590 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 UMODL1Q5DID0 1318 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 ERVK-7P63135 1459 aa4.17□□□□□ -1.74
SF3B1-212ENST00000496458 TET3O43151 1660 aa4.16□□□□□ -1.74
SF3B1-212ENST00000496458 GCC2Q8IWJ2 1684 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms