RNA–Protein interactions for RNA: ENST00000496101.5

GCOM1-211, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-211ENST00000496101 KATNB1Q9BVA0 655 aa17.1■□□□□ 0.33
GCOM1-211ENST00000496101 TIGARQ9NQ88 270 aa17.1■□□□□ 0.33
GCOM1-211ENST00000496101 GIMAP4Q9NUV9 329 aa17.1■□□□□ 0.33
GCOM1-211ENST00000496101 ATG4BQ9Y4P1 393 aa17.1■□□□□ 0.33
GCOM1-211ENST00000496101 C4orf51C9J302 202 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PGRMC2O15173 223 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PRKRAO75569 313 aaKnown RBP17.09■□□□□ 0.33
GCOM1-211ENST00000496101 CSF3P09919 207 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 LIMS3P0CW19 117 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 LIMS4P0CW20 117 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 FPR3P25089 353 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PTBP1P26599 531 aaKnown RBP eCLIP17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PRKAR1BP31321 381 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 OMPP47874 163 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 TGM4P49221 684 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PDGFRLQ15198 375 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 DECR1Q16698 335 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 FAM78AQ5JUQ0 283 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PDZK1Q5T2W1 519 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 OR2G6Q5TZ20 316 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 AGBL4Q5VU57 503 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PRICKLE2Q7Z3G6 844 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 TOR1AIP2Q8NFQ8 470 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 OR8K5Q8NH50 307 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 SLC9A6Q92581 669 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 OSTF1Q92882 214 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 C1GALT1C1Q96EU7 318 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 DIRAS2Q96HU8 199 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 YIPF4Q9BSR8 244 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 TEX12Q9BXU0 123 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 RMI1Q9H9A7 625 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 SLC6A20Q9NP91 592 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PHPT1Q9NRX4 125 aaPredicted RBP17.09■□□□□ 0.33
GCOM1-211ENST00000496101 RWDD3Q9Y3V2 267 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 MEIOCA2RUB1 952 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 PRR19A6NJB7 356 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 ACP5P13686 325 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 DUSP2Q05923 314 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 CRTC2Q53ET0 693 aaPredicted RBP17.09■□□□□ 0.33
GCOM1-211ENST00000496101 METAP1DQ6UB28 335 aaPredicted RBP17.09■□□□□ 0.33
GCOM1-211ENST00000496101 TMEM107Q6UX40 140 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 CCDC116Q8IYX3 515 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 VWA5B2Q8N398 1253 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 SMG7Q92540 1137 aaKnown RBP17.09■□□□□ 0.33
GCOM1-211ENST00000496101 OTUB1Q96FW1 271 aaPredicted RBP17.09■□□□□ 0.33
GCOM1-211ENST00000496101 ASB16Q96NS5 453 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 JAM3Q9BX67 310 aa17.09■□□□□ 0.33
GCOM1-211ENST00000496101 LYARQ9NX58 379 aaKnown RBP17.09■□□□□ 0.33
GCOM1-211ENST00000496101 GLOD5A6NK44 160 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 WASHC1A8K0Z3 465 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 HCN1O60741 890 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 TMCC2O75069 709 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 HLA-DQB1P01920 261 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 MPIP34949 423 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 SLC1A3P43003 542 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 CAMK1Q14012 370 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 IRF4Q15306 451 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 ZFP69Q49AA0 526 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 SLC35F1Q5T1Q4 408 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 AADACL4Q5VUY2 407 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 WASH2PQ6VEQ5 465 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 ACOT11Q8WXI4 607 aaPredicted RBP17.08■□□□□ 0.33
GCOM1-211ENST00000496101 GATAD2BQ8WXI9 593 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 TMEM203Q969S6 136 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 C16orf58Q96GQ5 468 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 BTBD1Q9H0C5 482 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 XKR8Q9H6D3 395 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 MBNL1Q9NR56 388 aaKnown RBP17.08■□□□□ 0.33
GCOM1-211ENST00000496101 SEMA4GQ9NTN9 838 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 KLHL28Q9NXS3 571 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 EXOGQ9Y2C4 368 aaKnown RBP17.08■□□□□ 0.33
GCOM1-211ENST00000496101 KCNE3Q9Y6H6 103 aa17.08■□□□□ 0.33
GCOM1-211ENST00000496101 GSAPA4D1B5 854 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 TBC1D3BA6NDS4 549 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 CCDC182A6NF36 153 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 CHST10O43529 356 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 PCDH8O95206 1070 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 CDH11P55287 796 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 FABP5Q01469 135 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 TGM3Q08188 693 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 DSG2Q14126 1118 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 MFSD9Q8NBP5 474 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 NUP43Q8NFH3 380 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 SMARCD2Q92925 531 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 ELP4Q96EB1 424 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 ZNF681Q96N22 645 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 DEPDC7Q96QD5 511 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 OSGEPL1Q9H4B0 414 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 CTPS2Q9NRF8 586 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 IMP3Q9NV31 184 aaKnown RBP17.08■□□□□ 0.32
GCOM1-211ENST00000496101 OBP2AQ9NY56 170 aa17.08■□□□□ 0.32
GCOM1-211ENST00000496101 YARS2Q9Y2Z4 477 aaKnown RBP17.08■□□□□ 0.32
GCOM1-211ENST00000496101 AP3D1O14617 1153 aa17.07■□□□□ 0.32
GCOM1-211ENST00000496101 KLF4O43474 513 aa17.07■□□□□ 0.32
GCOM1-211ENST00000496101 OR5F1O95221 314 aa17.07■□□□□ 0.32
GCOM1-211ENST00000496101 IGHA1P01876 353 aa17.07■□□□□ 0.32
GCOM1-211ENST00000496101 CCNYL3P0C7X3 344 aa17.07■□□□□ 0.32
GCOM1-211ENST00000496101 GALP22466 123 aa17.07■□□□□ 0.32
GCOM1-211ENST00000496101 CFL1P23528 166 aaKnown RBP17.07■□□□□ 0.32
GCOM1-211ENST00000496101 RCVRNP35243 200 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms