RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 NCBP2P52298 156 aaKnown RBP eCLIP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 PNLIPRP2P54317 469 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 MRPS22P82650 360 aaKnown RBP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 SLC18A2Q05940 514 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 MYBPHQ13203 477 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 ACSF3Q4G176 576 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 CT45A2Q5DJT8 189 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 NSUN5P2Q63ZY6 315 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 FAM71E1Q6IPT2 247 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 NOXRED1Q6NXP6 359 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 ARSKQ6UWY0 536 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 LARP4Q71RC2 724 aaKnown RBP eCLIP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 PLCZ1Q86YW0 608 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 SLC44A2Q8IWA5 706 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 HOMEZQ8IX15 550 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 WDSUB1Q8N9V3 476 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 TNIP2Q8NFZ5 429 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 OR7G2Q8NG99 324 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 SLC35A4Q96G79 324 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 METTL2AQ96IZ6 378 aaKnown RBP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 VSTM2LQ96N03 204 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 TRIB1Q96RU8 372 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 C12orf65Q9H3J6 166 aaKnown RBP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 CALHM2Q9HA72 323 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 FOLH1BQ9HBA9 442 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 GALNT9Q9HCQ5 603 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 SERHLQ9NQF3 203 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 MIEF1Q9NQG6 463 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 ZNF629Q9UEG4 869 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-214ENST00000496043 MID2Q9UJV3 735 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 MAPRE3Q9UPY8 281 aa11.62□□□□□ -0.55
PTPRF-214ENST00000496043 A0A087WV62 115 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 CD8B2A6NJW9 211 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 RGS14O43566 566 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 COQ9O75208 318 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 NME6O75414 186 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-214ENST00000496043 SLITRK5O94991 958 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 JUNP05412 331 aaKnown RBP11.61□□□□□ -0.55
PTPRF-214ENST00000496043 CPN1P15169 458 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 IL12BP29460 328 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 DLX5P56178 289 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 CORO7P57737 925 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 RCAN2Q14206 197 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 PRSS53Q2L4Q9 553 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 LIPMQ5VYY2 423 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 ENPP6Q6UWR7 440 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 OR14L1PQ8NHC6 308 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 ZPLD1Q8TCW7 415 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 EPS8L3Q8TE67 593 aaKnown RBP11.61□□□□□ -0.55
PTPRF-214ENST00000496043 L2HGDHQ9H9P8 463 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 MYNNQ9NPC7 610 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 C19orf53Q9UNZ5 99 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-214ENST00000496043 MRPS18CQ9Y3D5 142 aaKnown RBP11.61□□□□□ -0.55
PTPRF-214ENST00000496043 OR10H1Q9Y4A9 318 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 POLR3HQ9Y535 204 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-214ENST00000496043 LRBAP50851 2863 aa11.61□□□□□ -0.55
PTPRF-214ENST00000496043 PLOD2O00469 737 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 TRIM13O60858 407 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 CYP4B1P13584 511 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 BMP5P22003 454 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 NTSP30990 170 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 SRD5A2P31213 254 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 UQCRC1P31930 480 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 CYP27C1Q4G0S4 372 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 NPSR1Q6W5P4 371 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 IKBIPQ70UQ0 350 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 CDH24Q86UP0 819 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 C10orf107Q8IVU9 208 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 TRIM42Q8IWZ5 723 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 C4orf33Q8N1A6 199 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 TRMOQ9BU70 441 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 GATA5Q9BWX5 397 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-214ENST00000496043 OR2B2Q9GZK3 357 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 IQCGQ9H095 443 aaKnown RBP11.6□□□□□ -0.55
PTPRF-214ENST00000496043 GLIPR2Q9H4G4 154 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 LRTM1Q9HBL6 345 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 TNFRSF12AQ9NP84 129 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 SDHAF3Q9NRP4 125 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 C1orf109Q9NX04 203 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 TAS2R10Q9NYW0 307 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 FOXD3Q9UJU5 478 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-214ENST00000496043 MRTO4Q9UKD2 239 aaKnown RBP11.6□□□□□ -0.55
PTPRF-214ENST00000496043 L3MBTL1Q9Y468 752 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 CCL27Q9Y4X3 112 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 WIF1Q9Y5W5 379 aa11.6□□□□□ -0.55
PTPRF-214ENST00000496043 INTS1Q8N201 2190 aaKnown RBP11.6□□□□□ -0.55
PTPRF-214ENST00000496043 HCFC1P51610 2035 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 NCKAP5O14513 1909 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 MBD3L4A6NDZ8 208 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 MBD3L3A6NE82 208 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 MBD3L5A6NJ08 208 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 KDM4EB2RXH2 506 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 NPIPB8E9PQR5 432 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 UPK1AO00322 258 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 AZIN1O14977 448 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 ZWINTO95229 277 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 CHEK2O96017 543 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 PRPH2P23942 346 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 CTSSP25774 331 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms