RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 YIPF4Q9BSR8 244 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 ACBD3Q9H3P7 528 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 TAS2R10Q9NYW0 307 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 MAP1AP78559 2803 aaPredicted RBP21.1■□□□□ 0.97
COL27A1-208ENST00000494780 MED12Q93074 2177 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 CLCA1A8K7I4 914 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 SNRPAP09012 282 aaKnown RBP21.1■□□□□ 0.97
COL27A1-208ENST00000494780 TAC1P20366 129 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 CHMP24386 653 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 EEF1A1P68104 462 aaKnown RBP21.1■□□□□ 0.97
COL27A1-208ENST00000494780 ADAM8P78325 824 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 KEAP1Q14145 624 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 EFR3AQ14156 821 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 DEFB113Q30KQ7 82 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 TCHHL1Q5QJ38 904 aaPredicted RBP21.1■□□□□ 0.97
COL27A1-208ENST00000494780 EEF1A1P5Q5VTE0 462 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 AAGABQ6PD74 315 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 DACH2Q96NX9 599 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 ZNF382Q96SR6 550 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 PIGMQ9H3S5 423 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 PLEKHF2Q9H8W4 249 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 DLL4Q9NR61 685 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 DMGDHQ9UI17 866 aaKnown RBP21.1■□□□□ 0.97
COL27A1-208ENST00000494780 DLGAP4Q9Y2H0 992 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 MRPS18CQ9Y3D5 142 aaKnown RBP21.1■□□□□ 0.97
COL27A1-208ENST00000494780 WIF1Q9Y5W5 379 aa21.1■□□□□ 0.97
COL27A1-208ENST00000494780 A0A087WUV0 522 aaPredicted RBP21.09■□□□□ 0.97
COL27A1-208ENST00000494780 SUPT7LO94864 414 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 IL3P08700 152 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 CT45A8P0DMV1 189 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 CT45A9P0DMV2 189 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 KRT20P35900 424 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 LHX2P50458 406 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 GAB1Q13480 694 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 WHAMMP3Q1A5X7 153 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 ERCC6LQ2NKX8 1250 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 UNC50Q53HI1 259 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 CT45A2Q5DJT8 189 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 ZNF678Q5SXM1 525 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 TEX35Q5T0J7 233 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 FAM219BQ5XKK7 198 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 MMGT1Q8N4V1 131 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 GBP7Q8N8V2 638 aaPredicted RBP21.09■□□□□ 0.97
COL27A1-208ENST00000494780 IFT81Q8WYA0 676 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 INTS12Q96CB8 462 aaKnown RBP21.09■□□□□ 0.97
COL27A1-208ENST00000494780 ADOQ96SZ5 270 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 G6PC3Q9BUM1 346 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 GIMAP4Q9NUV9 329 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 GALNT8Q9NY28 637 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 CLCF1Q9UBD9 225 aa21.09■□□□□ 0.97
COL27A1-208ENST00000494780 ZNF469Q96JG9 3925 aaPredicted RBP21.09■□□□□ 0.97
COL27A1-208ENST00000494780 PCDH7O60245 1069 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 TSPAN2O60636 221 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 ULK1O75385 1050 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 HRGP04196 525 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 CHN1P15882 459 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 CPA2P48052 419 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 STARP49675 285 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 HEPACAMQ14CZ8 416 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 LGSNQ5TDP6 509 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 GPRIN3Q6ZVF9 776 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 LUZP2Q86TE4 346 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 OR9A2Q8NGT5 310 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 UHMK1Q8TAS1 419 aaKnown RBP21.08■□□□□ 0.97
COL27A1-208ENST00000494780 METTL6Q8TCB7 284 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 RNF138Q8WVD3 245 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 KAT2AQ92830 837 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 VSTM2LQ96N03 204 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 SFXN2Q96NB2 322 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 ANKRA2Q9H9E1 313 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 FBXL2Q9UKC9 423 aa21.08■□□□□ 0.97
COL27A1-208ENST00000494780 GNG14A0A1W2PPG7 69 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 PLOD2O00469 737 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 URI1O94763 535 aaPredicted RBP21.07■□□□□ 0.96
COL27A1-208ENST00000494780 ZNF708P17019 499 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 IL12BP29460 328 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 HMOX2P30519 316 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 PNLIPRP2P54317 469 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 DIO3P55073 304 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 CLDN18P56856 261 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 CORO7P57737 925 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 RAE1P78406 368 aaKnown RBP21.07■□□□□ 0.96
COL27A1-208ENST00000494780 MRPS22P82650 360 aaKnown RBP21.07■□□□□ 0.96
COL27A1-208ENST00000494780 SPIN4Q56A73 249 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 LARP4Q71RC2 724 aaKnown RBP eCLIP21.07■□□□□ 0.96
COL27A1-208ENST00000494780 EXOSC8Q96B26 276 aaKnown RBP21.07■□□□□ 0.96
COL27A1-208ENST00000494780 ACPTQ9BZG2 426 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 SHCBP1LQ9BZQ2 653 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 FOLH1BQ9HBA9 442 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 DKKL1Q9UK85 242 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 NFU1Q9UMS0 254 aa21.07■□□□□ 0.96
COL27A1-208ENST00000494780 RPH3AQ9Y2J0 694 aaPredicted RBP21.07■□□□□ 0.96
COL27A1-208ENST00000494780 SH3D21A4FU49 640 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 HOXB4P17483 251 aaPredicted RBP21.06■□□□□ 0.96
COL27A1-208ENST00000494780 GRK2P25098 689 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 ECHS1P30084 290 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 ACSM2AQ08AH3 577 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 BCL2A1Q16548 175 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 ACSM2BQ68CK6 577 aa21.06■□□□□ 0.96
COL27A1-208ENST00000494780 NPSR1Q6W5P4 371 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms