RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 FETUBQ9UGM5 382 aa11.47□□□□□ -0.57
SKA1-205ENST00000494518 DKKL1Q9UK85 242 aa11.47□□□□□ -0.57
SKA1-205ENST00000494518 UTS2RQ9UKP6 389 aa11.47□□□□□ -0.57
SKA1-205ENST00000494518 ZNF780BQ9Y6R6 833 aa11.47□□□□□ -0.57
SKA1-205ENST00000494518 USF3Q68DE3 2245 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 FRG2CA6NGY1 282 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 B4DXG7 233 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 POC1B-GALNT4F8VUJ3 575 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 CDH16O75309 829 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 GUCY1B2O75343 617 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 CBR3O75828 277 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 SMNDC1O75940 238 aaKnown RBP eCLIP11.46□□□□□ -0.57
SKA1-205ENST00000494518 RCBTB2O95199 551 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 TGM6O95932 706 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 IL3P08700 152 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 RHOXF2BP0C7M4 288 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 ADSLP30566 484 aaPredicted RBP11.46□□□□□ -0.57
SKA1-205ENST00000494518 MAGEA12P43365 314 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 PPICP45877 212 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 LHX2P50458 406 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 GFRA1P56159 465 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 GGTA1PQ4G0N0 100 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 ZNF628Q5EBL2 1059 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 TEX35Q5T0J7 233 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 METTL2BQ6P1Q9 378 aaKnown RBP11.46□□□□□ -0.57
SKA1-205ENST00000494518 TMEM81Q6P7N7 255 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 NPSR1Q6W5P4 371 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 P4HA3Q7Z4N8 544 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 PLCZ1Q86YW0 608 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 UBQLNLQ8IYU4 475 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 CDYL2Q8N8U2 506 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 EFHD2Q96C19 240 aaPredicted RBP11.46□□□□□ -0.57
SKA1-205ENST00000494518 CTHRC1Q96CG8 243 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 ZNF681Q96N22 645 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 DACH2Q96NX9 599 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 PAFAH2Q99487 392 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 LRRC1Q9BTT6 524 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 FAIM2Q9BWQ8 316 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 CDC42EP4Q9H3Q1 356 aaKnown RBP11.46□□□□□ -0.57
SKA1-205ENST00000494518 PRODH2Q9UF12 536 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 ZNF225Q9UK10 706 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 TMCO1Q9UM00 188 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 WIF1Q9Y5W5 379 aa11.46□□□□□ -0.57
SKA1-205ENST00000494518 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 A0A1W2PNV4 684 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 OR6C70A6NIJ9 312 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 A8MT66 165 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 TRIM49D1C9J1S8 452 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 CASKO14936 926 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 SCO2O43819 266 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 TNFSF13O75888 250 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 OTCP00480 354 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 SBK3P0C264 359 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 CTAGE8P0CG41 777 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 FOSL1P15407 271 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 DRD5P21918 477 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 IL12BP29460 328 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 SRD5A2P31213 254 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 HOXC12P31275 282 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 HTR6P50406 440 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 CLDN18P56856 261 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 SIRPAP78324 504 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 NKX6-1P78426 367 aaPredicted RBP11.45□□□□□ -0.58
SKA1-205ENST00000494518 FAM27E3Q08E93 113 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 SNTA1Q13424 505 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 VWA1Q6PCB0 445 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 LARP4Q71RC2 724 aaKnown RBP eCLIP11.45□□□□□ -0.58
SKA1-205ENST00000494518 ADGRE4PQ86SQ3 457 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 BIVMQ86UB2 503 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 CTAGE4Q8IX94 777 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 CNEP1R1Q8N9A8 125 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 OR4N2Q8NGD1 307 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 WNT2BQ93097 391 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 ISL2Q96A47 359 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 TMCO6Q96DC7 493 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 C18orf12Q96KH6 178 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 EBPLQ9BY08 206 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 ZNF395Q9H8N7 513 aaPredicted RBP11.45□□□□□ -0.58
SKA1-205ENST00000494518 FOLH1BQ9HBA9 442 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 KLHL28Q9NXS3 571 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 PACSIN3Q9UKS6 424 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 PSME2Q9UL46 239 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 SNX6Q9UNH7 406 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 EIF3LQ9Y262 564 aaKnown RBP11.45□□□□□ -0.58
SKA1-205ENST00000494518 DLGAP4Q9Y2H0 992 aa11.45□□□□□ -0.58
SKA1-205ENST00000494518 GPR55Q9Y2T6 319 aaPredicted RBP11.45□□□□□ -0.58
SKA1-205ENST00000494518 GNG14A0A1W2PPG7 69 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 A8MXE2 369 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 H0YC42 278 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 MANBAO00462 879 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 TO15178 435 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 SIAH2O43255 324 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 PCDH7O60245 1069 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 TSPAN2O60636 221 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 INHBBP09529 407 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 CT45A8P0DMV1 189 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 CT45A9P0DMV2 189 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 ZNF708P17019 499 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 GRK2P25098 689 aa11.44□□□□□ -0.58
SKA1-205ENST00000494518 DPP4P27487 766 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms