RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 METTL15A6NJ78 407 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 SHISA7A6NL88 538 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 CBLP22681 906 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 PPP2R1BP30154 601 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 DOC2BQ14184 412 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 ARMCX4Q5H9R4 360 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 FBXO42Q6P3S6 717 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 BHLHB9Q6PI77 547 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 OTUB1Q96FW1 271 aaPredicted RBP12.95□□□□□ -0.34
VCP-207ENST00000493886 OR2A14Q96R47 310 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 OR5M11Q96RB7 305 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 YIPF4Q9BSR8 244 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 LYARQ9NX58 379 aaKnown RBP12.95□□□□□ -0.34
VCP-207ENST00000493886 MS4A12Q9NXJ0 267 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 ARRDC5A6NEK1 342 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 CLCA1A8K7I4 914 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 CDK1P06493 297 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 ALOX5P09917 674 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 ZNF888P0CJ79 500 aaPredicted RBP12.94□□□□□ -0.34
VCP-207ENST00000493886 LASP1Q14847 261 aaKnown RBP12.94□□□□□ -0.34
VCP-207ENST00000493886 LEXMQ3ZCV2 418 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 TMEM107Q6UX40 140 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 TRIM48Q8IWZ4 208 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 TDHQ8IZJ6 230 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 AQP11Q8NBQ7 271 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 OR13H1Q8NG92 308 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 VANGL1Q8TAA9 524 aaPredicted RBP12.94□□□□□ -0.34
VCP-207ENST00000493886 NT5CQ8TCD5 201 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 FAM3CQ92520 227 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 C6orf106Q9H6K1 298 aaPredicted RBP12.94□□□□□ -0.34
VCP-207ENST00000493886 GIMAP4Q9NUV9 329 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 SCN3AQ9NY46 2000 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 SSX4O60224 188 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 SEMA7AO75326 666 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 UPK1BO75841 260 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 HMGN2P05204 90 aaKnown RBP12.94□□□□□ -0.34
VCP-207ENST00000493886 UGT2B7P16662 529 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 POLR2CP19387 275 aaPredicted RBP12.94□□□□□ -0.34
VCP-207ENST00000493886 CSNK2BP67870 215 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 ILF3Q12906 894 aaKnown RBP eCLIP12.94□□□□□ -0.34
VCP-207ENST00000493886 GPR18Q14330 331 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 TBCEQ15813 527 aaPredicted RBP12.94□□□□□ -0.34
VCP-207ENST00000493886 TCTN3Q6NUS6 607 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 CORO6Q6QEF8 472 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 SPATC1Q76KD6 591 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 CAPSLQ8WWF8 208 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 MYDGFQ969H8 173 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 IL4I1Q96RQ9 567 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 KCNS3Q9BQ31 491 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 NMNAT1Q9HAN9 279 aaPredicted RBP12.94□□□□□ -0.34
VCP-207ENST00000493886 C11orf16Q9NQ32 467 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 A0A0C4DFX4 3053 aa12.94□□□□□ -0.34
VCP-207ENST00000493886 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 GSAPA4D1B5 854 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 AGAP5A6NIR3 686 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 CCRL2O00421 344 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 MRPS14O60783 128 aaKnown RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 SOX14O95416 240 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 FHP07954 510 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 SLC35G6P0C7Q6 338 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 MPIP34949 423 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 PTGS2P35354 604 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 CBX5P45973 191 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 ANXA11P50995 505 aaKnown RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 DEF8Q6ZN54 512 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 OLIG3Q7RTU3 272 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 KRT73Q86Y46 540 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 RBM45Q8IUH3 476 aaKnown RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 B3GNT7Q8NFL0 401 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 OR56A1Q8NGH5 318 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 OR4D11Q8NGI4 311 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 MOAP1Q96BY2 351 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 CDADC1Q9BWV3 514 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 TWSG1Q9GZX9 223 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 ACTR10Q9NZ32 417 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 USP36Q9P275 1121 aaKnown RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 TRAV6A0A075B6T7 132 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 OR6C74A6NCV1 312 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 TNFSF14O43557 240 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 CTSVO60911 334 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 KCNK2O95069 426 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 GASTP01350 101 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 RPLP0P05388 317 aaKnown RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 IGFBP1P08833 259 aaPredicted RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 NR2F6P10588 404 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 SNRPNP63162 240 aaKnown RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 SELENBP1Q13228 472 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 CEBPEQ15744 281 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 ZNF770Q6IQ21 691 aaPredicted RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 SLC46A3Q7Z3Q1 461 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 LSRQ86X29 649 aaPredicted RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 SLC22A18ASQ8N1D0 253 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.93□□□□□ -0.34
VCP-207ENST00000493886 PATE1Q8WXA2 126 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 ZNF681Q96N22 645 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 OR2A5Q96R48 311 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 WFDC6Q9BQY6 131 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
VCP-207ENST00000493886 EXOSC4Q9NPD3 245 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms