RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 RPF2Q9H7B2 306 aaKnown RBP6.37□□□□□ -1.39
CAB39-206ENST00000493540 CAB39LQ9H9S4 337 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 AP5S1Q9NUS5 200 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 WWOXQ9NZC7 414 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 NUDT4Q9NZJ9 180 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 ASIC3Q9UHC3 531 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 PHF11Q9UIL8 331 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 EDARQ9UNE0 448 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 ERVK-19Q9WJR5 959 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 MTO1Q9Y2Z2 717 aaKnown RBP6.37□□□□□ -1.39
CAB39-206ENST00000493540 ALPK2Q86TB3 2170 aa6.37□□□□□ -1.39
CAB39-206ENST00000493540 MYOCOSA0A1B0GUC4 107 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 A0A1W2PR48 441 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 TCRBV9S1A1TA0A576 114 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 NCF1BA6NI72 391 aaPredicted RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 NCF1CA8MVU1 366 aaPredicted RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 DEFB108AA8MXU0 73 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 K7EPI3 171 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 FOXE1O00358 373 aaPredicted RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 PHGDHO43175 533 aaKnown RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 EEDO75530 441 aaKnown RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 SOX30O94993 753 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 RCBTB2O95199 551 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 ACTL6AO96019 429 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 SLC35E2P0CK97 266 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 CCDC166P0CW27 439 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 NR2F6P10588 404 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 NCF1P14598 390 aaPredicted RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 NAGAP17050 411 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 CPN2P22792 545 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 CTSSP25774 331 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 GDF1P27539 372 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 ABCD3P28288 659 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 UQCRC1P31930 480 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 CASP3P42574 277 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 TMED10P49755 219 aaKnown RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 NAGLUP54802 743 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 ARL4CP56559 192 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 IRF8Q02556 426 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 SNTA1Q13424 505 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 TIGD3Q6B0B8 471 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 OR52E8Q6IFG1 317 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 MED27Q6P2C8 311 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 PRSS57Q6UWY2 283 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 SPATC1Q76KD6 591 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 GPR180Q86V85 440 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 KIF18BQ86Y91 864 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 GPSM1Q86YR5 675 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 SLC35F6Q8N357 371 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 FBXO36Q8NEA4 188 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 CCT6BQ92526 530 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 UBE2E3Q969T4 207 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 CCDC140Q96MF4 163 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 CPNE1Q99829 537 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 SPATA9Q9BWV2 254 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 OR51B5Q9H339 312 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 SNX15Q9NRS6 342 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 LYARQ9NX58 379 aaKnown RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 GALNT8Q9NY28 637 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 TRPS1Q9UHF7 1281 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 GPR55Q9Y2T6 319 aaPredicted RBP6.36□□□□□ -1.39
CAB39-206ENST00000493540 NPFFR2Q9Y5X5 522 aa6.36□□□□□ -1.39
CAB39-206ENST00000493540 TENM1Q9UKZ4 2725 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 TUBAL3A6NHL2 446 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 GOLGA6L6A8MZA4 724 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 TO15178 435 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 EIF3HO15372 352 aaKnown RBP eCLIP6.35□□□□□ -1.39
CAB39-206ENST00000493540 CDH16O75309 829 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 PIAS1O75925 651 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 LRATO95237 230 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 ATP1B1P05026 303 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 ABCB1P08183 1280 aaPredicted RBP6.35□□□□□ -1.39
CAB39-206ENST00000493540 IFNGR1P15260 489 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 STMN1P16949 149 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 ZNF708P17019 499 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 TCP1P17987 556 aaKnown RBP6.35□□□□□ -1.39
CAB39-206ENST00000493540 GP5P40197 560 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 BUD31P41223 144 aaPredicted RBP6.35□□□□□ -1.39
CAB39-206ENST00000493540 LHX2P50458 406 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 GAS1P54826 345 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 CLDN18P56856 261 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 FBXW4P57775 412 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 GPX6P59796 221 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 RAB10P61026 200 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 FOXF2Q12947 444 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 PDIA2Q13087 525 aaKnown RBP6.35□□□□□ -1.39
CAB39-206ENST00000493540 SLAMF1Q13291 335 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 CAPRIN1Q14444 709 aaKnown RBP6.35□□□□□ -1.39
CAB39-206ENST00000493540 PCBP2Q15366 365 aaKnown RBP eCLIP6.35□□□□□ -1.39
CAB39-206ENST00000493540 PRICKLE4Q2TBC4 344 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 AP5B1Q2VPB7 878 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 GGTA1PQ4G0N0 100 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 EIPR1Q53HC9 387 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 LIPJQ5W064 366 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 SLC29A4Q7RTT9 530 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 OR4N5Q8IXE1 308 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 CIARTQ8N365 385 aaPredicted RBP6.35□□□□□ -1.39
CAB39-206ENST00000493540 RNF175Q8N4F7 328 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 SPATA6LQ8N4H0 392 aa6.35□□□□□ -1.39
CAB39-206ENST00000493540 FAM83FQ8NEG4 500 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms