RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 SOX17Q9H6I2 414 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-206ENST00000493232 FAM86C1Q9NVL1 165 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 SPEF1Q9Y4P9 236 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 SPO11Q9Y5K1 396 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 DLG5Q8TDM6 1919 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 DNAJC25-GNG10A0A024R161 153 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 BRINP1O60477 761 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 CTXN1P60606 82 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 ATAD3CQ5T2N8 411 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 CPEB1Q9BZB8 566 aaKnown RBP15.47■□□□□ 0.07
BRAT1-206ENST00000493232 NPIPB15A6NHN6 443 aaPredicted RBP15.47■□□□□ 0.07
BRAT1-206ENST00000493232 HTR6P50406 440 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 SLC26A5P58743 744 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 ACTBP60709 375 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 ACTG1P63261 375 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 ZNF252P-AS1Q0IIN9 211 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 BTBD16Q32M84 506 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 OR4K13Q8NH42 304 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 RNF215Q9Y6U7 377 aa15.47■□□□□ 0.07
BRAT1-206ENST00000493232 A0A1W2PPK0 400 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 hCG_1807616A0A1W2PRN6 198 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 SLC1A7O00341 560 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 CFL1P23528 166 aaKnown RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 GRPRP30550 384 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 ARHGAP19Q14CB8 494 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 HNRNPA1L2Q32P51 320 aaKnown RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 TBRG1Q3YBR2 411 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 COQ8AQ8NI60 647 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 CD300LFQ8TDQ1 290 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 KLHL42Q9P2K6 505 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 ZNF142P52746 1687 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 KIR2DS5A0A0G2JLQ3 304 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 A0A0G2JNG1 304 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 A6NIZ1 184 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 KIR2DS3K7RE56 304 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 DENRO43583 198 aaKnown RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 PABPC4LP0CB38 370 aaKnown RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 RAP1BP61224 184 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 RAP1AP62834 184 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 NTHL1P78549 312 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 SNTB2Q13425 540 aaKnown RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 KIR2DS5Q14953 304 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 RSU1Q15404 277 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 ABHD5Q8WTS1 349 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 ACTR10Q9NZ32 417 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 SRPK3Q9UPE1 567 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 DRGXA6NNA5 263 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 IFNA1P01562 189 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 MMP2P08253 660 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 C18orf21Q32NC0 220 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 RNASE10Q5GAN6 216 aaKnown RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 KDELC1Q6UW63 502 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 OR5AR1Q8NGP9 310 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 TANKQ92844 425 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 CHFRQ96EP1 664 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 METTL2AQ96IZ6 378 aaKnown RBP15.46■□□□□ 0.07
BRAT1-206ENST00000493232 PCDHA9Q9Y5H5 950 aa15.46■□□□□ 0.07
BRAT1-206ENST00000493232 MEIS3P2A8K0S8 358 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 RNASET2O00584 256 aaKnown RBP15.46■□□□□ 0.06
BRAT1-206ENST00000493232 KIAA0355O15063 1070 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 DNAJB6O75190 326 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 CNMDO75829 334 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 CA3P07451 260 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 CRABP1P29762 137 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 AGTR1P30556 359 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 NOVP48745 357 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 LBX1P52954 281 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 EFR3AQ14156 821 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 PLBD1Q6P4A8 553 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 DCP2Q8IU60 420 aaKnown RBP15.46■□□□□ 0.06
BRAT1-206ENST00000493232 OR7G3Q8NG95 312 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 ALOXE3Q9BYJ1 711 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 ADAM18Q9Y3Q7 739 aa15.46■□□□□ 0.06
BRAT1-206ENST00000493232 SMCO3A2RU48 225 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 F5H0A9 414 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-206ENST00000493232 RAB3BP20337 219 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 CDKN2CP42773 168 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 EEF1A1P5Q5VTE0 462 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 PRSS48Q7RTY5 328 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 TP53INP2Q8IXH6 220 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 ZNF619Q8N2I2 560 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 PINK1Q9BXM7 581 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 CDH20Q9HBT6 801 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 SDR39U1Q9NRG7 319 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-206ENST00000493232 G3V2L1 256 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 CASC3O15234 703 aaKnown RBP15.45■□□□□ 0.06
BRAT1-206ENST00000493232 CD63P08962 238 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 UBL4AP11441 157 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 DDCP20711 480 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 FOLR3P41439 243 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 FASLGP48023 281 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 PITPNBP48739 271 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 PIGFQ07326 219 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 ZFAND2BQ8WV99 257 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 TRUB1Q8WWH5 349 aaKnown RBP15.45■□□□□ 0.06
BRAT1-206ENST00000493232 SPTSSAQ969W0 71 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 KLF16Q9BXK1 252 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-206ENST00000493232 EVA1AQ9H8M9 152 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 DMRT3Q9NQL9 472 aa15.45■□□□□ 0.06
BRAT1-206ENST00000493232 SDC3O75056 442 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms