RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 FAM109AQ8N4B1 249 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 C2orf73Q8N5S3 287 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 PLA2G15Q8NCC3 412 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SMG8Q8ND04 991 aaKnown RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 WDR36Q8NI36 951 aaKnown RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 PLEKHO2Q8TD55 490 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 PPP4R1Q8TF05 950 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SOCS4Q8WXH5 440 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 GLG1Q92896 1179 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RPL3LQ92901 407 aaKnown RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 TCEAL3Q969E4 200 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ORAI1Q96D31 301 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FAHD2AQ96GK7 314 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ACCSQ96QU6 501 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 TNFRSF13CQ96RJ3 184 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RNF2Q99496 336 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ADAM2Q99965 735 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 NEURL2Q9BR09 285 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM79Q9BSE2 394 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 PCGF1Q9BSM1 259 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SYT11Q9BT88 431 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RSG1Q9BU20 258 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 LMF2Q9BU23 707 aaKnown RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 DDA1Q9BW61 102 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FTHL17Q9BXU8 183 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 LRRC2Q9BYS8 371 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 UCK2Q9BZX2 261 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 VCXQ9H320 206 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 LDAHQ9H6V9 325 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 MANSC1Q9H8J5 431 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ACTR5Q9H9F9 607 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ELOVL3Q9HB03 270 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 MYNNQ9NPC7 610 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 IFT46Q9NQC8 304 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 XPNPEP3Q9NQH7 507 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RGS18Q9NS28 235 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 THSD1Q9NS62 852 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CYSLTR2Q9NS75 346 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 SEMA4GQ9NTN9 838 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 VAPAQ9P0L0 249 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 IFNKQ9P0W0 207 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 KCNG2Q9UJ96 466 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF225Q9UK10 706 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 FZD4Q9ULV1 537 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 PADI3Q9ULW8 664 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 B9D1Q9UPM9 204 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 YBX2Q9Y2T7 364 aaKnown RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 RAXQ9Y2V3 346 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 GOLT1BQ9Y3E0 138 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF337Q9Y3M9 751 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ATG4BQ9Y4P1 393 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 OAS3Q9Y6K5 1087 aaKnown RBP3.94□□□□□ -1.78
BRCA1-220ENST00000492859 ARHGEF10O15013 1369 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 CEP152O94986 1710 aa3.94□□□□□ -1.78
BRCA1-220ENST00000492859 KCNE1BA0A087WTH5 132 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 A0A1B0GV72 72 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 A0A1W2PPC1 479 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PRAMEF22A3QJZ6 481 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NEMP2A6NFY4 417 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NKX6-3A6NJ46 265 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 HHLA1C9JL84 531 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 E9PAM4 449 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 H3BNX3 289 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SOX1O00570 391 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TFECO14948 347 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 XRCC2O43543 280 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 LATO43561 262 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PRKYO43930 277 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 OR10H2O60403 315 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 UGT1A9O60656 530 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 OR7A10O76100 309 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NKX2-2O95096 273 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PSMG1O95456 288 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CTDNEP1O95476 244 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 WDPCPO95876 746 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CETPP11597 493 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SRFP11831 508 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 COX4I1P13073 169 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 IL7RP16871 459 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PGAM1P18669 254 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ANXA7P20073 488 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MMP11P24347 488 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 FMO4P31512 558 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GKP32189 559 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CCR7P32248 378 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TIMP3P35625 211 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GRIA3P42263 894 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CTSKP43235 329 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NPBWR2P48146 333 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 IDH2P48735 452 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 FMO5P49326 533 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CYB561P49447 251 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GLUD2P49448 558 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SRP9P49458 86 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 DNA2P51530 1060 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MVDP53602 400 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 IRX4P78413 519 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 LCN2P80188 198 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms